| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5476 |
|---|
| Symbol | |
|---|
| ID | 8336834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6315365 |
|---|
| End bp | 6316123 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958578 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003116176 |
|---|
| Protein GI | 256394612 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.608762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.384797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA CCAACTACGA CACGGAGCAG TATCAGGACT ACGCGCGCGG CCGTGCCCTG
ACGAAGGAGC AGATGGAGGC GTGGATCGGA GCCTTCCGCG CGCTGCTGCC CCAGGGCCGT
CCGCTGACCG GTCTGGACGT CGGCTCCGGG ACGGGCCGGT TCGCCCCGGC GCTGGCGAGC
GCGTTCGGAC CGGTGACCGG GATCGAGCCG TCCGACCGGA TGCGCGAGGT CGCGCAGTCG
CAGTCCCAGC ACCCTGACGT CCGGTACCTC GCGGGCTCCG CCGAGGACAT CCCGGTGCCG
ACCGCCGGCG CCGACTACGC CATGCTGCTG CTGTCCTGGC ACCACGTCCT GGACAAACCG
AGGGCGGCGC GCGAACTCGC CCGGGTCGTC CGGCCCGGCG GACGCCTGAT CATCCGGTCC
GGCTACGGCG ACCAGATGCC GTGGATCTGG TGGCTGGAGC ACTTCCCGAA CGGCTTCGAG
AAGGACGCCG CGCTGTTCCC TCCGCTGCAC CAGGTCATCG AGACCTTCAG CACCGCCGGC
TGGCGCGTCC GCACCTTCGG ACCGTTCACC GAGCCCTCCC CCGGCACCTA CGGCGAGATG
CTCGACCGGC TGCGGCTGCG CACGCACTCC ATCTTCAACC AGTTCACGGC CGAGGAGATG
GAGACCGGCT TCGAGCGCCT GGAGCAGGCA GTCGCGGCCG ATCCGGACGC CCCGGCGCCC
GCCGACCCGG CTCCGCTGCT GAGCTTCGAG CGCCGCTGA
|
|---|
| Protein sequence | MRRTNYDTEQ YQDYARGRAL TKEQMEAWIG AFRALLPQGR PLTGLDVGSG TGRFAPALAS
AFGPVTGIEP SDRMREVAQS QSQHPDVRYL AGSAEDIPVP TAGADYAMLL LSWHHVLDKP
RAARELARVV RPGGRLIIRS GYGDQMPWIW WLEHFPNGFE KDAALFPPLH QVIETFSTAG
WRVRTFGPFT EPSPGTYGEM LDRLRLRTHS IFNQFTAEEM ETGFERLEQA VAADPDAPAP
ADPAPLLSFE RR
|
|---|
| |