Gene Caci_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5475 
Symbol 
ID8336833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6314696 
End bp6315217 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID644958577 
Producthypothetical protein 
Protein accessionYP_003116175 
Protein GI256394611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.103381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.365248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCGAGAACCC GATCGCCGAC GGCCGCCACG ACTTCGACTT CCTGGCCGGG 
ACCTGGAAGG TCGAGCACCG CAAGCTCGTC GCCATGGCCG ACCCGCACTG CACCGAGTGG
GTGGAGTTCG AAGGCGTCCA GTGGATGCGC CAGACCCTCG GCGGCCTGGG CAACGTCGAC
AACCTCACGA TCGAGAAGAT GCCGGACGGC AGCCGCTACG AGGGCATGTC CCTGTGCCTG
TTCGACCCCG AGAGCGGACA GTGGAGCATC TGGTGGGCCT CCACCATCGC CCCCGGCCGC
CTCGACCCGC CGGTCAAGGG CCGCTGGACC GGCACGCACG GCGTCTTCGA ATGCTCCGAC
ACCCTCGAGG GCACGCCGAT CGAGGTCCGC CTCGACTGGG ACGCCTTCGA CGCCGACACC
GCGCGGTGGG AGCAGTCGTT CTCCTTCGAC GGCGGCCAGA CCTGGGTGCA CAACTGGCGG
ATGTCGTTCA CGCGGATCTC GCATGAGGCG CTGGCGGCTT AG
 
Protein sequence
MTTTENPIAD GRHDFDFLAG TWKVEHRKLV AMADPHCTEW VEFEGVQWMR QTLGGLGNVD 
NLTIEKMPDG SRYEGMSLCL FDPESGQWSI WWASTIAPGR LDPPVKGRWT GTHGVFECSD
TLEGTPIEVR LDWDAFDADT ARWEQSFSFD GGQTWVHNWR MSFTRISHEA LAA