Gene Caci_5474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5474 
Symbol 
ID8336832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6314050 
End bp6314622 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content72% 
IMG OID644958576 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003116174 
Protein GI256394610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.387077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.265431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGG CATCTGACTC CCCGAAGGCA TTGGCACCAG GCGTCGTCCC GCCGGAGACG 
ATCGATCTGG ACGGCTACCA CCTGCGCCGT GCCACCGCCG AGGACACCGA GGCGCTGCAC
GAGGCGGTCA AGGCCAGCTT CGCCGAGCTG CACCCGTGGA TGCCGTGGTG CACCGAGCCG
GTGGAGATCG CTTCGCAGCG GGACTTCATC GAGCGCTCCG AGACCGGCTG GACCGCGCAG
ACGGCCTTCA ACTGGCTGAT CATCGACGCC GGCGGCCACC TCATCGGCAC CATCGGCCTG
ATGGACCGGA TCGGCCCCGG CGGCCTGGAG ATCGGCTACT GGCTGCGCAG CGACGCCACC
GGCCGCGGCG TGATGACCCG CGCCGCCGCC CGCGTCACCG ACATCGCCCT GGCCCTGCCC
GGCGTCGAGC GCGTCGAGAT CCACTGCGAC GCCGCGAACG TCCGCAGCGC CGCGGTCCCC
CGCCGCCTCG GCTACCGCCT GGACCGCGAA GCGCACGCCG AGCCGACCTC GCCCGGGGAG
TCGGGGCTGA GTCAGTACTG GGTGACGCCG TGA
 
Protein sequence
MTAASDSPKA LAPGVVPPET IDLDGYHLRR ATAEDTEALH EAVKASFAEL HPWMPWCTEP 
VEIASQRDFI ERSETGWTAQ TAFNWLIIDA GGHLIGTIGL MDRIGPGGLE IGYWLRSDAT
GRGVMTRAAA RVTDIALALP GVERVEIHCD AANVRSAAVP RRLGYRLDRE AHAEPTSPGE
SGLSQYWVTP