Gene Caci_5470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5470 
SymbolargJ 
ID8336828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6307807 
End bp6308958 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID644958572 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_003116170 
Protein GI256394606 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.183143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA CCTCCGCGAA GGGCTTCCGG GCTTCCGGGA TCGCCGCCGG AATCAAGGAC 
TCCGGGAACC CGGACCTCGC GCTGGTCGTC AACGACGGTC CGCTGACCGC CGCCGCCGGC
GTCTTCACCT CCAACCGCGT GAAGGCCGCC CCGGTCGTGT GGTCCGAGCA GGTCCTCAAG
AGCGGCGCGG TCAAGGCCGT GGTCCTGAAC TCCGGCGGCG CGAACGCCTG CACCGGCCCG
GCCGGCTTCC AGGACACGCA CAAGACCGCC GAGGAACTCG CCGCGCTGCT GGACGCCTCG
GCCGCCGAGG TCGCCGTGTG CTCCACCGGC CTGATCGGCG TCCGGCTGCC GATGGAGGCG
CTGCTGTCCG GGCTGAAGAC CGCCGCCGGG GCGCTCGCCG CCGACGGCGG AGCGGCCGCC
GCGACCGCGA TCATGACCAC CGACACCGTC GCCAAGACCG CCGAGGCGCG CGGCACCGGC
TACGCCGTCG GCGGCATGGC CAAGGGCGCC GGGATGCTGG CGCCGGGTCT GGCCACGATG
CTCGTCGTGC TGACCACCGA CGCGGTGGCC GACGCCGGCG TGCTCGACTC CGTGCTGCGC
GCCGCCACGA AGGTCACCTT CGACCGCGTC GACTCCGACG GCTGCATGTC CACGAACGAC
ACCGTCCTGC TGCTCGCCTC CGGTGCCTCC GAGACCGTGC CGGACCTCGC CGAGTTCCAG
GCCGCCGTCA CCTCGGTGTG CGCCGACCTC GCGCGCCAGC TCATCGGCGA CGCTGAAGGC
GCGACCAAGG ACATCGCCGT GGAGGTCGTC CGCGCCGCCA GCGAGGACGA GGCGGTCCAG
GTCGCCAAGG CTGTCACCCG CAGCAACCTG TTCAAGTGCG CGATGTACGG CAACGACCCG
AACTGGGGTC GGGTCCTGTC CGCGGTCGGG ACCACCGACG CGGCGTTCGA GCCCGACCAG
CTCTCGGTCG CCATCAACAA CGTCTGGGTC TGCCGCGACG GCGGCGTCGG TGAGGACCGC
GACCTGGTCG ACCTGACCGG CCGCGAGGTC AAGGTCACCG TCGACCTCGC CGCCGGCACC
TCCTCGGCGA CCGTCTGGAC CAACGACCTG ACGCCCGGGT ACGTCCACGA GAACTCGGCG
TACTCCTCAT GA
 
Protein sequence
MSVTSAKGFR ASGIAAGIKD SGNPDLALVV NDGPLTAAAG VFTSNRVKAA PVVWSEQVLK 
SGAVKAVVLN SGGANACTGP AGFQDTHKTA EELAALLDAS AAEVAVCSTG LIGVRLPMEA
LLSGLKTAAG ALAADGGAAA ATAIMTTDTV AKTAEARGTG YAVGGMAKGA GMLAPGLATM
LVVLTTDAVA DAGVLDSVLR AATKVTFDRV DSDGCMSTND TVLLLASGAS ETVPDLAEFQ
AAVTSVCADL ARQLIGDAEG ATKDIAVEVV RAASEDEAVQ VAKAVTRSNL FKCAMYGNDP
NWGRVLSAVG TTDAAFEPDQ LSVAINNVWV CRDGGVGEDR DLVDLTGREV KVTVDLAAGT
SSATVWTNDL TPGYVHENSA YSS