Gene Caci_5466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5466 
Symbol 
ID8336824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp6304156 
End bp6304662 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content74% 
IMG OID644958568 
Productarginine repressor 
Protein accessionYP_003116166 
Protein GI256394602 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.738958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0217545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CCACCGTCCC GCAGACCCGC ACCGCGCGCC ACCAGCGGAT CGCTCTGCTG 
CTGGAGCGGC ACTCCGTCCG CTCCCAGGCC GAGCTGGGCC GGCTGCTGGC CGAGGACGGC 
CTGTCGGTCA CCCAGGCCAC GCTGTCGCGC GACCTGGACG AGCTCGGCGC GGTCCGGGTG 
CGCGACGGTG CCAGCAACCT GGTGTACGCG ATCCCGGCCG AGGGCGGCGA CCGCACGCCG 
GTCGCCGCGC AGCCGGAGCC GGTGTTCGAG CACCGGCTGC ACCGGCTGCT GGGCGAGTTG 
CTGGTCAGCG CCGAGGCCTC GGCGAACCTG GTGGTCGTGC GCACGCCTCC GGGCGCGGCG 
CAGTTCCTGG CCAGCGCCTT CGACAAGGCG CAGATCCCGG AGATCCTGGG CAGCATCGCC 
GGCGACGACA CGGTGCTGCT GATCAGCCGC GATCCGGACG GCGGCACGGC GCTGGCGGCG 
AAGCTGCTGG CGGCGGCTGA GAACTGA
 
Protein sequence
MSEATVPQTR TARHQRIALL LERHSVRSQA ELGRLLAEDG LSVTQATLSR DLDELGAVRV 
RDGASNLVYA IPAEGGDRTP VAAQPEPVFE HRLHRLLGEL LVSAEASANL VVVRTPPGAA 
QFLASAFDKA QIPEILGSIA GDDTVLLISR DPDGGTALAA KLLAAAEN