| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5461 |
|---|
| Symbol | |
|---|
| ID | 8336815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6290959 |
|---|
| End bp | 6291984 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644958559 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116161 |
|---|
| Protein GI | 256394597 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0553967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0634777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGCCG GGTTCGGGGG CGTCGTCGAC AGTGAGTCGC GGGAGCCTGA GGAGATCCTG
GAGATCGCTC CTGATGCCAC TATCGACAAG CTGGACAAGG ATATTCAGGA TGAGCTCGCT
CAGCTGCTGA AGTCCAAGGC GACGCTGGTG GCCGGGCATC TGGTGACGGC TGGGCAGAAC
CTGGACGAGG ATCCGGAGCT GGCCTACCGG CATGCGCGGA CGGCGATGAA GCTGGCGCCG
CGTTTGGCTT CGACGCGTGA GGCGGCCGGG TTGGCTGCGT ACCTCACCGG GCGGTACTCG
GAGGCGCTGG CGGATCTGCG GACCGTGCGG CGGATCACCG GAACCAACGA TCACTGGGCC
GTCATGGCCG ACTGTGAGCG GGGTCTGGGG CGTCCGGAGC GGGCTTTGGC GATGGCTGCC
GCGCCGGAGG CGAAGACGCT CGACAAGGAG ACGCAGATCG AGCTGCGGAT GGTCGCGGCC
GGTGCTCGCA TGGACATGGA GCAGCCTGAG GCCGCCGTGG TGCAGCTGCA GGGCGCCGAT
CTGACGCCGG CGAAGGTCCA GCCGTGGACC GCGCGGCTGC GCTACGCCTA CGCCGAGGCG
CTGCTCGCCG CCGAGCGCGA GGACGAGGCC CGCGACTGGT TCATGCGCGC CGCCGACGCC
GACTCCGAAG GGCTCACCGA CGCCGCCGAG CGGGTCGACG AGCTGGACGG TATCGCCTTC
GACGAATTCG AGGACGAACT CGACGCGGAG GAAGGCGTGG AGGGCGGCGT GGAGGACGGT
GCCGCGGATG GCGAGGCCCT CGAGAACGTC GATGAAGATG ACGAGGATGA GGATGAGGAT
GGCGAGGATG ACGAGGGCGA CGCGGAGCTG AGCGCCGACC ACGACCTCGC CGACGAGGAC
GAGGACGACG ACCTCGAAGA CGACGAAGAA GACGACGACG ACTTCGAAGA CGAAGACGAC
GACGACGAGG ACACCGACTC GGGTCATCAC GACTCCGACC CCGGACCCGC CTCCGACAAC
CGCTGA
|
|---|
| Protein sequence | MVAGFGGVVD SESREPEEIL EIAPDATIDK LDKDIQDELA QLLKSKATLV AGHLVTAGQN
LDEDPELAYR HARTAMKLAP RLASTREAAG LAAYLTGRYS EALADLRTVR RITGTNDHWA
VMADCERGLG RPERALAMAA APEAKTLDKE TQIELRMVAA GARMDMEQPE AAVVQLQGAD
LTPAKVQPWT ARLRYAYAEA LLAAEREDEA RDWFMRAADA DSEGLTDAAE RVDELDGIAF
DEFEDELDAE EGVEGGVEDG AADGEALENV DEDDEDEDED GEDDEGDAEL SADHDLADED
EDDDLEDDEE DDDDFEDEDD DDEDTDSGHH DSDPGPASDN R
|
|---|
| |