| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5452 |
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| Symbol | |
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| ID | 8336806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6279553 |
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| End bp | 6280755 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958550 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_003116152 |
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| Protein GI | 256394588 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.180738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.458665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CCGCCAAGCC CGCCGAGCCC GCCGATGCCG CGCGTGCCGC CGTTTCCGCA
CATCCCGCCG GCGCCGCGGA GCTCATCGAG CCGGTCGGGT TCGCCGAGGC CCTCGAGCCG
GTGCGCAAGC GCTCGCGCAT CACCACGACT CTGCGTGTCG CGCCGTTCCT GTTGATCGCC
TTGTCCGCCC TGGCCGACGC CGAAAGCACC GCCGGGCAGC AATACGACCG CTACCTGGTC
GCCGCGCCGG CCCTGGCCGC CTCCGTCTGG GGCGCGGGGA CCACCATCCT CGTCGGGATC
CTCGCCATGC TCGCCGAGGT GGCCCGCGGG CTGATCCACG ACGGCCGGGT CGGTCGCCCG
ACCGCCTCGG TCATCGCCGT CATCTCCACG GTCACCCTGG CCGCCGCGTA CGCCGCGCGG
GTCCGCGTCC AGCGCGAACG CGACCTCGCC GAGATCCGCT CGGTGGCGCG CACCGCGCAG
CAGGTGGTGC TGCGTCCGCT GCCCGGCAGG CTCGGCACCG TCGACCTGGC CCTCTACTAC
AGCGCCGCCG CCGCGCAGGC GCAGATCGGC GGCGACCTGT ACGAGGCGGT CCGCACCCGG
CACGGAGTGC GGATCATCCT CGGCGACGTG CAGGGCAAGG GACTGCCGGC GGTGGAAACG
GCGGCGGCGC TGCTCGGCTC TTTCCGCGAG GCGGCCTACG ACGCCGAAGA CCTCGCCGAA
CTCGCCGGGC GCCTGGAGAC CAGCCTGCGG CGCTACGCCG AACGCGCCTC CACGCCGGAC
TCCGCCGAAC GCTTCGCCAC CGCCATCCTG ATGGAGATCC CCGACGGCCG CCCCGAAGCC
TTCCTCCTCA ACTGCGGCCA TCCCCCGCCG CTGCTGATCC AGCCCGGCGG CGTCCGCGCG
ATCGAGCCCG ACGCGCCGCT TCCTCCGCTC AACCTGTCCG CGCTGGTCGC GAGCGAATAC
CGCACCGAGA CGGTCCCGTT CGGTCCCGGT GACCGGGTCC TGCTCTACAC CGACGGCGTC
AGCGAGGCCC GGAACAGCGC CGGTGTGTTC TACCCGCTGG CCGACCGGCT CACCGGCTGG
ATCGCAGAGC CCTCACCCCA ACTGCTCGCC GATCTCAGCC GCGACCTGAA CCACTATGCG
GGCGGCGCCA CGAGCGACGA CGCGGCCGTG CTGATCGCCG CGCGCCATCG GCCCATCTCA
TGA
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| Protein sequence | MSESAKPAEP ADAARAAVSA HPAGAAELIE PVGFAEALEP VRKRSRITTT LRVAPFLLIA
LSALADAEST AGQQYDRYLV AAPALAASVW GAGTTILVGI LAMLAEVARG LIHDGRVGRP
TASVIAVIST VTLAAAYAAR VRVQRERDLA EIRSVARTAQ QVVLRPLPGR LGTVDLALYY
SAAAAQAQIG GDLYEAVRTR HGVRIILGDV QGKGLPAVET AAALLGSFRE AAYDAEDLAE
LAGRLETSLR RYAERASTPD SAERFATAIL MEIPDGRPEA FLLNCGHPPP LLIQPGGVRA
IEPDAPLPPL NLSALVASEY RTETVPFGPG DRVLLYTDGV SEARNSAGVF YPLADRLTGW
IAEPSPQLLA DLSRDLNHYA GGATSDDAAV LIAARHRPIS
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