Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5445 |
Symbol | |
ID | 8336799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6271649 |
End bp | 6272095 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958543 |
Product | SPW repeat protein |
Protein accession | YP_003116145 |
Protein GI | 256394581 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.488563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.725666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAGA CCGCACCGCG GCATGCGTCG GACATCACCA CGCATCCGGA TGCGAGGGAA ATGCAGGAAC GGTTCGCCAA GGTCGTCCAA GGTCCCCGCG CGACGGCGCT GGACGGCATG GTCGTGCTGC TCGGGATGTA CCTCGCGATA TCGCCGTGGG TGGTGCATTC CATCGACGCC AACCTGCGGG TGAACAACCT GGTGATCGGC CTGACCCTGG CCGCGTTCGG CTTCGGCCTG GCCCTCCAGC CCGAGCGGCT GTACCGGCTC GGCTGGATCT GCGTGCCGGT CGGCGTCTGG ATGATCATCT CGCCCTGGGT GGTGACCGTG GGCCACACCG CCGGAAGGGC CGTCATCTGG AACAACGTCG CCATCGGCGC CGTGGCCGTG CTGCTCGGCC TGGCCAGCCA AGGGATGACG ATGGGCGCCG TGCGAAGAAG GCGCTGA
|
Protein sequence | MSETAPRHAS DITTHPDARE MQERFAKVVQ GPRATALDGM VVLLGMYLAI SPWVVHSIDA NLRVNNLVIG LTLAAFGFGL ALQPERLYRL GWICVPVGVW MIISPWVVTV GHTAGRAVIW NNVAIGAVAV LLGLASQGMT MGAVRRRR
|
| |