Gene Caci_5445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5445 
Symbol 
ID8336799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6271649 
End bp6272095 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID644958543 
ProductSPW repeat protein 
Protein accessionYP_003116145 
Protein GI256394581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.488563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.725666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA CCGCACCGCG GCATGCGTCG GACATCACCA CGCATCCGGA TGCGAGGGAA 
ATGCAGGAAC GGTTCGCCAA GGTCGTCCAA GGTCCCCGCG CGACGGCGCT GGACGGCATG
GTCGTGCTGC TCGGGATGTA CCTCGCGATA TCGCCGTGGG TGGTGCATTC CATCGACGCC
AACCTGCGGG TGAACAACCT GGTGATCGGC CTGACCCTGG CCGCGTTCGG CTTCGGCCTG
GCCCTCCAGC CCGAGCGGCT GTACCGGCTC GGCTGGATCT GCGTGCCGGT CGGCGTCTGG
ATGATCATCT CGCCCTGGGT GGTGACCGTG GGCCACACCG CCGGAAGGGC CGTCATCTGG
AACAACGTCG CCATCGGCGC CGTGGCCGTG CTGCTCGGCC TGGCCAGCCA AGGGATGACG
ATGGGCGCCG TGCGAAGAAG GCGCTGA
 
Protein sequence
MSETAPRHAS DITTHPDARE MQERFAKVVQ GPRATALDGM VVLLGMYLAI SPWVVHSIDA 
NLRVNNLVIG LTLAAFGFGL ALQPERLYRL GWICVPVGVW MIISPWVVTV GHTAGRAVIW
NNVAIGAVAV LLGLASQGMT MGAVRRRR