| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5444 |
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| Symbol | |
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| ID | 8336798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6268952 |
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| End bp | 6271438 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958542 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003116144 |
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| Protein GI | 256394580 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.615677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCTC GAACACCCTG GTCACGGCCG CTCAGGAGCC GTACACAGGC GCGCTCGACC
CGGCGCGTGG CGCACGTCGC CATCGCCGCC GCGCTCACCT TGGCGGCCGT CGACGCCGCC
GCCGCGACCG GCGCCGCGGC CAGCACCGCG CAGCCGAGAT ACCTGGACCG GACCGCGCCG
ATCGCCGCGC GGGTCAACGA TCTGCTCGGC CGCATGACCC TGCCGGAGAA GGCCGGGCAG
ATGGATCAGC AGTTGGTCGA CAACGCGACC GCCGCCTCCG GCGGCGCCTG CGGGGCGGCC
GGCTTCAACC TTCCGACCCC CGCCTGTATG CAGTCGGCGC TGATCGACCA GAACGTCGGC
TCGATCCTGG CCGGCGGAAC CGATAACCCT TCTGACACCA CGGGCAGCGG CACCAGCGGC
AACACCGCTC AGGACTGGGC CAACGACTAC AACACCATCC AGCAGTACGC GATCGCCCAC
TCGCGGCTGC ACATCCCGCT CAGCTTCGGC GTGGACGCCG TGCACGGCTT CGGCCACCCC
TGGCAGGCGC CGCTGTTCCC GCAGTCGATC GGCATGGGCG CGACCTGGGA CCCCTCGCAG
GCGAAGGCCG GCGGCGCGAT GACCGCCACC GCGCTGCGTT CGACGGGCTG GACGTGGGCC
TTCGCCCCGG TCCAGGACCT GGCGCGCGAC AACCGCTGGG GACGCACCTA TGAGACGTGG
GCCGAGGAGC CCGCTCTGTC TTCGGCGATG GGAGCCGCAA ACGTTACCGG CCTGCAGACC
CCGGCTCCGG CCGGCGGCCT GGACGTCAGC GCGACCGTCA AGCACTTCGC CGGGTATTCG
GAGTCGGTCA ACGGCCACGA CCGCGACGAA GCGCTGCTGC CGCTGAACTA TCTGCAGAGC
ACGATCCTGC CGTCCTACGC CGGGGCGATC AACGCCGGCG CCGACGCGGT GATGGTCGAC
TCCGGGTCCA TCAACGGCGT CCCAGCCACC TCCTCGCACT ACCTGCTCAC CGACATCCTC
CGCGGCCAGA TGGGCTTCAA GGGCGTCGAG ATCAGCGACT ACCAGGACGT GCAGGCGCTG
CAGACGACCT ACCACATCGC CGCCAGCCTG CCGGACGCCG TCGCCCTGGC GGTGAACGCG
GGTCTGGACA TGAGCATGGA GGTCAACGGC CCGGACCAGT GGCAGAGCGC GATCATCCAG
GACGTCGGCA ACGGCAAGAT CAGGATGTCG ACGATCAACG ACGCCGTGCG CCGCATCCTG
ACCATGAAGT TCCAGCTCGG ACTGTTCGAC CAGCCCTGTG TGGCCGACCC GGGCAAGCCG
TGCCTGAACG CCGGGGCGGC CGACGCGGTC GTGACCTCCG GGCGTGACCA GACCCTGAAG
GCCACGCAGG AGTCGATCAC GCTGCTGCGC AACCAGAACA GCGTGCTGCC GCTGCCCGCC
GGCAGCCGCG TGGTGGTGAC CGGTCCCAGC GCGGACTCGA TGACCAACCA GCTCGGCGGC
TGGAGCGTGA GCTGGCAGGG CGTCGCCGGC GCCGGGCACG TGTGCTGCAT GGGCTCGCCG
GACCAGATCC CGCCGGGGAC CACGGTGCAG ACCGGGGTCC TGGGCGCCGA CACCCACGCC
ACGGCCATCT CCGACCAGGC GGCCGCCGTG GCTGCCGCCC CGAACACCGA CGCCTACGTC
GCGGTGGTGG GGGAGAAGGC GTACGCCGAA GGCCTCGGCG ACAATCCCGC CCCGGCGCTC
CCGGCGGACC AGCAGGCGCT GATCTCCGCG CTGGAGGCGA CCGGCAAGCC GGTGATCGTC
GTGGTCGAGG CGGGCCGTCC GGTCGCTCTG GGCTCGGCGG AGAAGGCCAG CGCGGTCGTG
ATGGCCTACC AGGGCAGCAC CGAGGCCGGG CAGGCCGTGG CCGACGTGCT GTTCGGCAAG
ACCGACCCCA GCGGCCACCT GTCGATCAGC TGGCCGTCCG ACGCGCCGGC GGTCGGCGGC
GACTTCAACA GCACCGCGCC GTCCCCGCTG GGCGACGAGC CGAAGTTCTT CGACCAGCTG
CCGGGTACCG GCTCCGGGCC GGGGAACGCC TACAACCCGC TCTATCCGTT CGGATACGGG
CTCTCCTACA CCACCTTCAG CCACTCGGCG CTGGCGGTGA CGCCGAACGC CTCGGCGCAC
GGCACCCTCA CCGCGACGCT GACCGTCACC AACACCGGAA CGCGCGACGG CACGGACGTG
GTGCCGCTGT ACGTGGCCCA GCCGGTCAGC GCCTCGGCCG AGCCGCCGCA GCGCCTGGTC
GGCTTCACCC GGGTGACGCT GGCCGCCGGG GCGTCGCAGA CCGTGAAGGT CAGCTTCCCG
GCCACGGCGC TGGCCCGGAG CCAGGGCGAC ATCAACGCAT CCGCGCCGCC GACCGTCGAG
CCCGGCGGCT ACGTGCTGCA GGTCGACAAG GAGGCTGACA CCACTCCGTA CGACGTCGAC
CTGTCGGCGC CGTTCACGCT GCGGTGA
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| Protein sequence | MRARTPWSRP LRSRTQARST RRVAHVAIAA ALTLAAVDAA AATGAAASTA QPRYLDRTAP
IAARVNDLLG RMTLPEKAGQ MDQQLVDNAT AASGGACGAA GFNLPTPACM QSALIDQNVG
SILAGGTDNP SDTTGSGTSG NTAQDWANDY NTIQQYAIAH SRLHIPLSFG VDAVHGFGHP
WQAPLFPQSI GMGATWDPSQ AKAGGAMTAT ALRSTGWTWA FAPVQDLARD NRWGRTYETW
AEEPALSSAM GAANVTGLQT PAPAGGLDVS ATVKHFAGYS ESVNGHDRDE ALLPLNYLQS
TILPSYAGAI NAGADAVMVD SGSINGVPAT SSHYLLTDIL RGQMGFKGVE ISDYQDVQAL
QTTYHIAASL PDAVALAVNA GLDMSMEVNG PDQWQSAIIQ DVGNGKIRMS TINDAVRRIL
TMKFQLGLFD QPCVADPGKP CLNAGAADAV VTSGRDQTLK ATQESITLLR NQNSVLPLPA
GSRVVVTGPS ADSMTNQLGG WSVSWQGVAG AGHVCCMGSP DQIPPGTTVQ TGVLGADTHA
TAISDQAAAV AAAPNTDAYV AVVGEKAYAE GLGDNPAPAL PADQQALISA LEATGKPVIV
VVEAGRPVAL GSAEKASAVV MAYQGSTEAG QAVADVLFGK TDPSGHLSIS WPSDAPAVGG
DFNSTAPSPL GDEPKFFDQL PGTGSGPGNA YNPLYPFGYG LSYTTFSHSA LAVTPNASAH
GTLTATLTVT NTGTRDGTDV VPLYVAQPVS ASAEPPQRLV GFTRVTLAAG ASQTVKVSFP
ATALARSQGD INASAPPTVE PGGYVLQVDK EADTTPYDVD LSAPFTLR
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