Gene Caci_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5436 
Symbol 
ID8336790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp6261778 
End bp6262395 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content73% 
IMG OID644958534 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003116136 
Protein GI256394572 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.770498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG CGCGCCGCAC CCAGGAGGAA CGTTCCGCCG CCACCCGCCG GCTGCTGCTC 
GACGCGACCG TCGAGTGCCT GGTGAAGCAC GGCTACGCCG GGACCACCAC CACGCGGGTG 
TCCGAGCTGG CCGGGGTCTC GCGCGGGGCG CAGGTGCACC ACTTCGCGAC CAAGGACGAG 
CTGGTCGTGG CGGCGGTGCG GCATCTGGCC GAGCAGCAGG CGATGCTGGT GCTGGCGCGG 
CCGGACCTCC TCGCCGGGTC CGCCGATCCG GTCGGGGACG CCCTGGAGCT GCTGTGGAAG 
GCGCATCAGG GACCGACGTT CGACGCCGCG ATCGAGCTGT GGGTCGCCGC GCGGACCGAT 
CCGGACCTGC GGGAGGCGAC GACCGCGTTC GAGCGGGCGC TGACGGCGCG GTTCGCGGAG 
GTCTCGGTGA TCTTGTTCGG GCCGGAGGTG ACCGCGCTGC CCGATTTCCA GCTGCGGCTG 
CTGACCGCGC TGGAGGCGAT CCGAGGGCTG CGGATGGTCT CCTTCCTGCA CCCGAATCCC 
TCGGCGCGTC TCGACGAGCG GTGGCAGAGG TCGAAGGCGC TGTTGCGGCC GCTGTTCGAG 
GTGTCGGCCT CGCGCTGA
 
Protein sequence
MTTARRTQEE RSAATRRLLL DATVECLVKH GYAGTTTTRV SELAGVSRGA QVHHFATKDE 
LVVAAVRHLA EQQAMLVLAR PDLLAGSADP VGDALELLWK AHQGPTFDAA IELWVAARTD 
PDLREATTAF ERALTARFAE VSVILFGPEV TALPDFQLRL LTALEAIRGL RMVSFLHPNP 
SARLDERWQR SKALLRPLFE VSASR