| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5413 |
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| Symbol | |
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| ID | 8336767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6238702 |
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| End bp | 6240648 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958511 |
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| Product | virulence factor MVIN family protein |
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| Protein accession | YP_003116113 |
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| Protein GI | 256394549 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACC TCCACATCGA GCACGGCCAC GCTGACCACG GCCAGATCGA GCACGACGAA
GCCGGGGTGG TCGAGCCAAA GGCAGGTGCG AAGGCCGGTG CCCGGACCAC CGTGCCCTTC
CAGCAGTCGC TGACGGTGAC CAGCCCGACC GACTCGACGA GTCCGACCGA TTCGACCAGG
CTGCCGGCGC AAGCCGACCA CCCCGCCCCC ACCGACGCCC CCGCGACCCC CCACCTCCAG
CCCCACCTCC ACCCTCACCC CCAGCCCGGA CCCCGCCGCC CCCGCAGCGC CTCCACCCTC
CTCGGCGCCG CCGTCCTCAT CGCCATAGCC ACGGTCGCCT CGCGCGTCGT GGGCTTCGGT
CGTTGGCTCG TCTTCTCGCA CACCGTGGGT GCCGGATCGC TGGCCGACGC GTACAACTCC
GCGAATCAGC TTCCGAACAT CGTCTTCGAG ATCACTGCCG GGGGCGCCCT GGCCGGCGTC
GCCGTTCCGC TGCTGGCCGG GCCGCTGACC GGTGGTGGCG ACGGGCCCGC TGATCGTGCC
CGCGCCTCGC ACATCGTCTC GGCGTTGCTG ACCTGGACGC TGGCGATCCT CATCCCGTTG
TCGGCTACCG GTGTCGCGTT GGCCGGGCCG ATGGGTCAGA TCCTCGGGAG TGGCCATGGC
GCCGATTACA CCCACCAGAT CAGCCGCTTC CTGATCTTCT TCCTGCCGCA GATACCGCTT
TACGGCGCCG CCGTCGTCCT CGGCGCGACC CTGCAAGCCG ACCGCCGTTT CCTGGCGCCG
GCGCTCGCGC CGTTGCTGTC CAGCCTGGTC GTCATCGCCT CCTACACGGC GTTCGCCTTC
CTCGACCGCG GCCGCGGCGC GCACCTGCGC GGTCTGCGCC ACGCCCCTGA GCTCGTCCTC
GCGCTCGGTA CGTCCGCGGG CGTGCTCATC CTGGTCCTGT CGCTCTTGCC GGCGGTCCGC
CGCGCCAAGC TCGCGCTGCG CCCGACCTTC CGCTTTCCCG AGGGCGTCGC GCGCAAGGCT
CGCTCGCTGG GCGTGGCGGG TGTCGCGACC CTGATCGCGC AGCAGCTCGC GGTCCTGACC
ATCGTCCTGC TCTCCAACGC CGGGCACGCC TCGACCGGCA CCCTCACCGT CTTCAACCTG
GTCTGGGCCG TCTACTCCCT GCCCTACGCC GTCCTCGCGG TCCCGGTCGC GACCAGCGCC
TTCACCGACC TGTCCGCGAA GTGGGCCGCC GGGGACCGCC CCGGTTACGC GCACGGCGTC
GCGGCGACGA CCCAGGCGGT GGTGATCTTC TCCGCCGCCG GCGCCTCGGT GCTGGCTGCC
GCCGCGTGGC CGACGGCCCG GCTGTTCCTG ACCGCGCGCC ACGGCACCGG CGGCAGCGTG
ACCGTGGAGA TGATGGGCCA GGGCTTGATC GCCTTCGCCC CCGGCCTGAT CGGCTACGGC
CTGCTGGCCC ACCTGAGCCG TGCCCTGTAC GCCGCCGGAC GCGGACGCGC CGCCGCGACC
GCCGTCTGCG CCGGCTGGTT CACCGTCCTG GCCGCCGACC TGACGCTGGT CTCCCTGCTC
CCCGGCGAGA AAGCGGTCAT CGCGCTCGGC CTGGGCAACG CCCTGGGCAT GTCCGTGGCC
GGCGCCCTGC TGCTCACCGC CGTGCACCGC GGCATCGGCC GGGACGCGCT GGTCGGCGTC
GGCCGCGCCG GGCTCGTCGC GGCGCTCGCG GCGGCCGTCG CCGCGCCGGT CGGGATGGTG
CTCGCCGGGC TGCCCGGCGC CACCGGCCCG CTGCGCGCGA TGCTCATCGG CGCGACGACC
GCGCTGCTGA CCATCGCGCT GTTCGCCTTC ACGGCGATCA CGGCTGCCAA GCGCCTGCTC
CCGGACACCG ACTGCGGCAA ATGGCTGCGC GCTCCCATCG AAAACCGGAA CCGGAACCGG
AACCGGCGCG AACGCAGGGC CCCGTGA
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| Protein sequence | MADLHIEHGH ADHGQIEHDE AGVVEPKAGA KAGARTTVPF QQSLTVTSPT DSTSPTDSTR
LPAQADHPAP TDAPATPHLQ PHLHPHPQPG PRRPRSASTL LGAAVLIAIA TVASRVVGFG
RWLVFSHTVG AGSLADAYNS ANQLPNIVFE ITAGGALAGV AVPLLAGPLT GGGDGPADRA
RASHIVSALL TWTLAILIPL SATGVALAGP MGQILGSGHG ADYTHQISRF LIFFLPQIPL
YGAAVVLGAT LQADRRFLAP ALAPLLSSLV VIASYTAFAF LDRGRGAHLR GLRHAPELVL
ALGTSAGVLI LVLSLLPAVR RAKLALRPTF RFPEGVARKA RSLGVAGVAT LIAQQLAVLT
IVLLSNAGHA STGTLTVFNL VWAVYSLPYA VLAVPVATSA FTDLSAKWAA GDRPGYAHGV
AATTQAVVIF SAAGASVLAA AAWPTARLFL TARHGTGGSV TVEMMGQGLI AFAPGLIGYG
LLAHLSRALY AAGRGRAAAT AVCAGWFTVL AADLTLVSLL PGEKAVIALG LGNALGMSVA
GALLLTAVHR GIGRDALVGV GRAGLVAALA AAVAAPVGMV LAGLPGATGP LRAMLIGATT
ALLTIALFAF TAITAAKRLL PDTDCGKWLR APIENRNRNR NRRERRAP
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