Gene Caci_5411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5411 
SymbolpyrG 
ID8336765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6235690 
End bp6237387 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content71% 
IMG OID644958509 
ProductCTP synthetase 
Protein accessionYP_003116111 
Protein GI256394547 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACATC AGACGAAACA CCTGTTCGTA ACCGGGGGCG TCGCCTCCTC GCTGGGCAAG 
GGCCTCACCG CCTCCTCGCT GGGCGCCCTG CTCAAGGCCC GCGGCCTGCG GGTCACCATG
CAGAAGCTCG ACCCCTACCT GAACGTCGAC CCCGGGACGA TGAACCCGTT CCAGCACGGC
GAGGTGTTCG TCACCGACGA CGGCGCCGAG ACCGACCTGG ACGTCGGGCA CTACGAGCGG
TTCCTGGACA CCGACCTGCA CGGCTCGGCG AACGTCACCA CCGGCCAGGT GTACTCCGCG
GTGATCGCCA AGGAGCGGCG CGGGGAGTAC CTCGGCGACA CCGTCCAGGT GATCCCGCAC
ATCACCAACG AGATCAAGTC CCGGATCCGG CGCATGGGCG GCGACGACGT GGACATCGTG
ATCACCGAGG TCGGCGGGAC CGTCGGCGAC ATCGAGTCGC TGCCGTTCCT GGAGGCCGCG
CGCCAGCTCC GGCACGAGGT CGGCCGGGAG AACGTGTTCT TCCTGCACGT CTCCCTGGTC
CCCTACATCG GCCCGTCGGG GGAGATGAAG ACCAAGCCGA CCCAGCACTC GGTGGCCTCG
CTGCGCAGCA TCGGCATCCA GCCGGACGCC ATCGTCTGCC GCGCCGACCG GCCGATCAGC
CAGGCCATCA AGCGCAAGAT CTCGCTGATG TGCGACGTGG ACGAGGAGGC CGTGGCCGCG
GCCGTGGACG CGCCGTCGAT CTACGACATC CCCAAGGTCC TGCACACCGA GGGCCTGGAC
GCCTACGTGG TGCGCCGGCT GAACCTGCCC TTCCGGGACG TGGACTGGAC GCAGTGGGAC
GATCTGCTGC GCCGGGTGCA CGAGCCGGAC CACGACCTCA CCGTCGCCCT GGTCGGCAAG
TACATCGACC TGCCGGACGC CTACCTGTCG GTGACCGAGG CGCTGCGGGC CGGCGGCTTC
GCCAACTCCG CGCGGGTGAA CATCCGCTGG GTCCCCTCCG ACGAGTGCGC GACCGACGAG
GGCGCGGCCA AGCACCTGAC CGGCGTGGAC GGGATCTGCG TGCCCGGCGG CTTCGGCGTG
CGCGGTATCG AGGGCAAGGT CAACACGGTC AAGTACGCCC GCGAGAACAA GATCCCGCTG
CTCGGCCTGT GCCTGGGCCT GCAGTGCATC GTGATCGAGG GCGCGCGCCA CCTGGCCGGG
ATCGCCGCCG CCAACTCCGC GGAGTTCGAC GAGGCGACCC CGGACCCGGT CATCTCCACC
ATGGCCGACC AGCGCGACAT CGTGGCCGGC CAGGGCGACC TGGGCGGCAC CATGCGCCTG
GGCCTGTACC CGGCCAAGCT CGCCGAGGGC ACCATCGTGC GCGACCTGTA CGACGGCGCC
CCGTACATCG AGGAGCGCCA CCGCCACCGC TACGAGGTGA ACAACGCCTA CCGCCCGCGC
CTGGAGGAGG CCGGCCTGGT CTTCTCCGGC ACCTCGCCGG ACGGCCGCCT GGTGGAGTTC
GTCGAGCTCC CGCGCGAGAC GCACCCCTTC CTGGTCGGCA CGCAGGCGCA CCCCGAACTG
CGCTCGCGTC CGACCCGCCC GCACCCGCTG TTCGCCGGCC TGATCGCCGC GGCCGTGGAG
CGCTCGAAGG GCGTGGCCGC CGACGCCGCC GCGATCGCCG CCGGAGAGGC GCTGGCCGAG
GCGGCAGCCG GAGCCTGA
 
Protein sequence
MAHQTKHLFV TGGVASSLGK GLTASSLGAL LKARGLRVTM QKLDPYLNVD PGTMNPFQHG 
EVFVTDDGAE TDLDVGHYER FLDTDLHGSA NVTTGQVYSA VIAKERRGEY LGDTVQVIPH
ITNEIKSRIR RMGGDDVDIV ITEVGGTVGD IESLPFLEAA RQLRHEVGRE NVFFLHVSLV
PYIGPSGEMK TKPTQHSVAS LRSIGIQPDA IVCRADRPIS QAIKRKISLM CDVDEEAVAA
AVDAPSIYDI PKVLHTEGLD AYVVRRLNLP FRDVDWTQWD DLLRRVHEPD HDLTVALVGK
YIDLPDAYLS VTEALRAGGF ANSARVNIRW VPSDECATDE GAAKHLTGVD GICVPGGFGV
RGIEGKVNTV KYARENKIPL LGLCLGLQCI VIEGARHLAG IAAANSAEFD EATPDPVIST
MADQRDIVAG QGDLGGTMRL GLYPAKLAEG TIVRDLYDGA PYIEERHRHR YEVNNAYRPR
LEEAGLVFSG TSPDGRLVEF VELPRETHPF LVGTQAHPEL RSRPTRPHPL FAGLIAAAVE
RSKGVAADAA AIAAGEALAE AAAGA