| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5409 |
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| Symbol | |
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| ID | 8336763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6234010 |
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| End bp | 6234813 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958507 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003116109 |
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| Protein GI | 256394545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.470788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCG CACCGCCCGC TGTCCCCGCG CCGGTTCCCG CTTCGACTCC CGCGCCAGTT
CAAGCTCCAG CCTTCACCGC CGTCGTCATC GACTTCTTCG GTACCCTCAC CACCAGCGCC
CCCGACGAGG TCTGGTTCCA AGCCGCCGCG GCCAGCGCCG CTCCCCTCGG CCTGGAGCCG
GCCCTGTGGC GCGAGACGCT GACCGCGAGC TTCGTCGAGC GCGCGACCGG CGCCCTCGGC
GATCTGCCCG AGACCTTCCG CGCCCTGGCC CGGCGCTGCG GCGTCGACCC CAGCGAGGGC
GCCCTGGCCG AGGCGTGCGA GGCGCGCGTG AAGGCGCAGA ACGAGCTGTT CGTCTTCCGC
GAGGACGTCC TCGGCGCGCT CCAAGCTCTC AAAGCGCGCG GCTATCGCGT CGGGCTGCTG
AGCGACTGCA CGCCCGAGCT CCCCGTCGCC TGGCCGCAGC TCGCGGTCTC CGGCTTCTTC
GACACCGCGG TCTTCTCCTG CGTCGAGGGT CTGAAGAAAC CGAATCCCGC CTTCTTCCGC
CTCGTCGCCG AGCGCCTCGG GGTGGCGCCC GCCGACTGCC TCTACGTCGG CGACGGCGGC
TCGCGCGAGT TGAGCGGCGC GGCGGCGGTC GGGATGACGC CGCTGATGCT GCGCGCCGAG
GACTGGCACA GCAACAGCGC CTATGACCGC GAGGACGATT GGGCCGGTGC GGAGATCGCC
TCCTTCACCG CGCTGATCAG CAAGATCGAC GCCGCCGGTC TCAGCGCTCG GTCACTTCTG
GCTCAGCATC AGGACCGCGA TTAG
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| Protein sequence | MTPAPPAVPA PVPASTPAPV QAPAFTAVVI DFFGTLTTSA PDEVWFQAAA ASAAPLGLEP
ALWRETLTAS FVERATGALG DLPETFRALA RRCGVDPSEG ALAEACEARV KAQNELFVFR
EDVLGALQAL KARGYRVGLL SDCTPELPVA WPQLAVSGFF DTAVFSCVEG LKKPNPAFFR
LVAERLGVAP ADCLYVGDGG SRELSGAAAV GMTPLMLRAE DWHSNSAYDR EDDWAGAEIA
SFTALISKID AAGLSARSLL AQHQDRD
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