Gene Caci_5408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5408 
Symbol 
ID8336762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6233159 
End bp6233902 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID644958506 
Productmetallophosphoesterase 
Protein accessionYP_003116108 
Protein GI256394544 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.240658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGGG TGGCGGTGCT GTCCGACGTG CACGCCAACG TCCCGGCGCT GCGCGCCGTG 
CTCGCCGAGC CCGACGTCGC CGCCGCCGGT CTCATCGTCT TCAACGGCGA CCTGACCTGG
GGCGTCGACC CCGACGGGAC GGTGGCCATC GTCCAGGCGC TCGGCCGGCG CGCGGTGTGC
GTGCGCGGCA ACAGCGAGCG CTACGTCCGG CAGATCACCA TCGGCGCCTC CGCCCCGGCC
ACCCCGCGCC AGGAGTGGGT CCCGGCGCAC CACGGCACCG GCTCGCTGGC CTTCGTCGGC
TCGTTCCCGT TCAGCATCGT CGTGGACGTC CCGGGTCTGG GCCCGGTCCG CTTCTGCCAC
GGTTCCCCGC GCAGCGACAA CGAGGCGGTG ACGCCCGGCA CGCCGGCGCT GCGCTTCGCC
GAGATGACCG CCGGCATCGA GGAGGACGTG CTGGTCACCG GCCACACCCA CCTGCAGTTC
GACCGCTTCG TGGGCACCCG GCGCAGCATC AACCCCGGCA GCGTCGGCCT GCCCTACCAC
CGCGACGAGC CCGGCGTGGC GCACTGGGCC CTGCTCGGAC CGGACGTCCA GCTCCGGACC
ACCCGCTACG ACGTGCGCGA ATCGGTCGCC GCGAGCGTGG CCTCCGGCGA CCCCGGCCAC
GCCCGCATCG CCGAGCTGCT GCTGACGCCG CCGACGCCGG AGGAGATCAT CGCCGAGGCC
GAAGAGCTGG TGCTGGTCGA CTGA
 
Protein sequence
MDRVAVLSDV HANVPALRAV LAEPDVAAAG LIVFNGDLTW GVDPDGTVAI VQALGRRAVC 
VRGNSERYVR QITIGASAPA TPRQEWVPAH HGTGSLAFVG SFPFSIVVDV PGLGPVRFCH
GSPRSDNEAV TPGTPALRFA EMTAGIEEDV LVTGHTHLQF DRFVGTRRSI NPGSVGLPYH
RDEPGVAHWA LLGPDVQLRT TRYDVRESVA ASVASGDPGH ARIAELLLTP PTPEEIIAEA
EELVLVD