| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5406 |
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| Symbol | |
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| ID | 8336760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6230828 |
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| End bp | 6232162 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958504 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003116106 |
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| Protein GI | 256394542 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.283217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGC TTTTCGCGTA CCCCGGCTAC GCCCGATTCT GGAGCGCGGA CACGGTGTCC
ACGTTCGGGA CTTATGTCGC GACCGTGGCG TTGCCGACGC TGGCGGTGAT CGTCCTCAAG
GCCAGCGACA CCCAGGTCGG GCTGCTCAAC GGCGCGCGCT GGACGCCGTA TCTGCTGTTC
GGGCTGCTGG CCGGCGTGGT GGCGGACCGC TATCGGCGCC GGCCGATCCT GGTCGCGACC
GATCTCGTGC GCGGGGTGCT GCTGGCGGTG GTCGCCGTGC TCGCCGCGGT GCACATCGTG
AACATCTACG AACTCGCCGG GTTCGTCTTC GTCTTCGGCA TCCTGTCGCT GCTCTACGAC
GCGGCGCACC AGTCCTACCT GCCGCGCCTG GTCCCGCCGG CGAGTCTGAC GGTCGCCAAC
GCGCGCCTGG AGCAGACCAC GGCGCTGGCG CAGACGACCG GGCCGTTCAT CGGCGGCGCG
CTGGTGGCGG CGATCGGGGC GCCGCTGGCG ATGATGATCG ACGCGGCGTC GTATCTGGTT
TCCGGGCTGA CGCTGGCGAC GATCCGCGTT CCGGAGCCCG TGCCGCATGC CGAGTCGCGG
AATCTGAAGG CGGAGATGCG CGAAGGACTG CGCTTCGTCT ACCGCGACCC GGTGATGCGC
GCCTACGCGC TGACGCTGCA CGCGCGGTTC CTGTTCGCGA GCGTCATCGG GACGGTCTTC
ACGCTGTTCG TGCTGCGCGA TCTGGGCGCC GGGTCGCCGC GGGCGGCGTT CGGGCTGGGG
CTGGTGCTGG CCGCCGGCGG GGTCGGGGCG GTGATCGGCA ACGGGATGGC GCAGCGGTTG
GGGCGCGGGG GCGTCGGGCG CGTGATGGTC GCCGAGCGGT TGGCCGAGCC GGTCGCGTGG
TCGGTGGCGG CGCTCGCGGT GAGCGGCGCC GCGGGGTGGG CGATGGTGGC CGGGGCGCAG
TTCTTGGCGT GGCTGGCGCT CGGGGCGAGC GGGCCGAACG AGATGGCGTA TCGGCAGTCG
GCGACGCCGG ACCGGTTGCA GGGACGCGTG AACGCCACGG TCCGGTCGCT GAATTGGGGC
ATGATCACCT TCGGCGCGCC GGTCGGCGGG CTGCTGGCGC AGCATCTCGG GTATCGGCCG
GCGCTGTGGG CCGGGGTCGC GGGAATGGCG GCTTCCGGAG TCGTCGCCGC GCTGTCGCCG
ATGCGCCGTG CGCGCGTCAC GGAAACGCCG GAGGACCCGG AAAAACCTGA AATCCTTGCA
GACCCTGTAA ACCCCGAAGA CCCGGAACCT CAGGAAGGAA CTGGCGAAAA CACCGCCAAG
GGCGTCGGCG TTTAG
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| Protein sequence | MTRLFAYPGY ARFWSADTVS TFGTYVATVA LPTLAVIVLK ASDTQVGLLN GARWTPYLLF
GLLAGVVADR YRRRPILVAT DLVRGVLLAV VAVLAAVHIV NIYELAGFVF VFGILSLLYD
AAHQSYLPRL VPPASLTVAN ARLEQTTALA QTTGPFIGGA LVAAIGAPLA MMIDAASYLV
SGLTLATIRV PEPVPHAESR NLKAEMREGL RFVYRDPVMR AYALTLHARF LFASVIGTVF
TLFVLRDLGA GSPRAAFGLG LVLAAGGVGA VIGNGMAQRL GRGGVGRVMV AERLAEPVAW
SVAALAVSGA AGWAMVAGAQ FLAWLALGAS GPNEMAYRQS ATPDRLQGRV NATVRSLNWG
MITFGAPVGG LLAQHLGYRP ALWAGVAGMA ASGVVAALSP MRRARVTETP EDPEKPEILA
DPVNPEDPEP QEGTGENTAK GVGV
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