| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5399 |
|---|
| Symbol | |
|---|
| ID | 8336753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6223760 |
|---|
| End bp | 6225043 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644958497 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_003116099 |
|---|
| Protein GI | 256394535 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase
[TIGR03447] cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.139344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.289642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAT GGCCCGCCCC CGAGGTCCCC GAACTGCCCG GCCACGGCTC CGCCGTCCGG
CTCCACGACA CCGCGGCGCA GGGCCTGGTG CCCACGCCCG CGGCGGCCCC CGGCGAGGCG
GCCCGCATCT ACGTGTGCGG CATCACGCCC TACGACGCGA CCCACATGGG ACACGCCAAC
ACCTACCTGA CGTTCGACCT GATCCAGCGC GCCTGGCTGG ACGCCGGACA CCCGGTGTCC
TACGTGCAGA ACGTCACCGA CGTCGACGAC CCGCTGCTGG AGCGCGCCGC GGCCACCGGC
CGGGACTGGG AGGCGCTCGC GGAGTCCGAG ACCGCTCTGT TCCGCGAGGA CATGACCGCC
CTGCGCATCC TGCCGCCGCA GCACTACGTC GGCGCCGTGG AGTCGATCCC GCTGGTCGTG
GACCTGGTCG TGAAGCTGCT GGAGCGCGGC GCCGCCTACG ACGTGGACGG CGACGTCTAC
TTCTCGGTGC ACGCCGACCC CGCCTTCGGC GCCGTCGCGC ACCTGGACGC CCCCGAGATG
CTCACCACCT TCGGCGAGCG CGGCGGCGAC CCGGGCCGCC CCGGCAAGAA GGACCCGCTG
GACTGCCTGC TCTGGCAGGC CGAACGCGAG GGCGAGCCGT CCTGGGAGCC CGGCGAGCAG
GCGCGCGCCG CGGGTCTGAA GCCCGGCCGC CCCGGCTGGC ACATCGAGTG CGCCGCGATC
GCCCTGGAGC ACCTGGGCAT GGGCATCGAC CTGCAGGGCG GCGGCAGCGA CCTGGCCTTC
CCGCACCACG AGATGGGCGC CTCCGAGGCG CAGGTGGTCA CCGGGCAGCG GCCCTACGCG
CACAGCTACG TGCACTCCGG CATGGTCGGC CTGGATGGCG AGAAGATGTC GAAGTCCAAG
GGCAACCTGG TCCTGGTCTC CAAGCTCCGC CACGCCGGCG TCGACCCCAT GGCGATCCGC
CTGGCACTGC TGGCGCACCA CTACCGCACC GACTGGGAGT GGACCGACGC CGACCTGGTG
AGCGCCGTGG CCCGCCTGGC GCGCTGGCGT GCGGCGGTGT CCCGGCCCGA CGGCGTCCCG
GCGGACGACG TGCTGGACGC GGTGCGCGCG CGGATCGCCG ACGACCTCGA CGCGCCGGGG
GCGCTCGCGG TGATCGACGC CTGGGTGGCC CGGCAGGAGG CCGCCGACGG CGACGACACC
GCCGCGGCTT CGGCACAGCG GAACACGGCG GCACCGGGAC AGATCAGCCG GATCACGGAC
GCGCTGCTGG GCGTGGCGCT GTAA
|
|---|
| Protein sequence | MHAWPAPEVP ELPGHGSAVR LHDTAAQGLV PTPAAAPGEA ARIYVCGITP YDATHMGHAN
TYLTFDLIQR AWLDAGHPVS YVQNVTDVDD PLLERAAATG RDWEALAESE TALFREDMTA
LRILPPQHYV GAVESIPLVV DLVVKLLERG AAYDVDGDVY FSVHADPAFG AVAHLDAPEM
LTTFGERGGD PGRPGKKDPL DCLLWQAERE GEPSWEPGEQ ARAAGLKPGR PGWHIECAAI
ALEHLGMGID LQGGGSDLAF PHHEMGASEA QVVTGQRPYA HSYVHSGMVG LDGEKMSKSK
GNLVLVSKLR HAGVDPMAIR LALLAHHYRT DWEWTDADLV SAVARLARWR AAVSRPDGVP
ADDVLDAVRA RIADDLDAPG ALAVIDAWVA RQEAADGDDT AAASAQRNTA APGQISRITD
ALLGVAL
|
|---|
| |