Gene Caci_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5366 
Symbol 
ID8336720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6187828 
End bp6188025 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content66% 
IMG OID644958464 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003116066 
Protein GI256394502 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.53351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.352058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAACG ACATGCGGGC ACTGCGGCAG GGCAAGGGCC TGTCGCAGCA GGACCTGGGC 
GAAGCGCTCG GGGTCTCGCG GCAGACGGTC AACGCGATCG AGCAGAGCCG CTACGATCCC
TCGCTCCCCC TGGCGATCCG CATCGCACGG TATTTCGGCA CAACAGTGGA GGGGATGTTC
CATGTCGACG GATGCTGA
 
Protein sequence
MRNDMRALRQ GKGLSQQDLG EALGVSRQTV NAIEQSRYDP SLPLAIRIAR YFGTTVEGMF 
HVDGC