Gene Caci_5361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5361 
Symbol 
ID8336715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6179340 
End bp6180191 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID644958459 
Productprotein of unknown function DUF574 
Protein accessionYP_003116061 
Protein GI256394497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC ACGAGGGACT GGGCGGTCCG CTGCCGCCGC TGTTCGACGC CCCGCAGCCG 
CGGCGTCCGG CCGCGCTCGA CACCGACTCC CCGCACGTCG CGAGGTTGTA CGACTTCCTG
CTCGGCGGCA AGGACCACTT CCGCGCCGAC CGCGCAGCCG CCGAACTCCT GCTGCGCGCC
AATCCGTACT TACGCGACAC CTGCCGCGAA CAGCGCGACT TCCTGCGCCG CGCCCTCGTG
CGCCTGGCGA CCGTCGGCGT GCGCCAGTTC GTCGACATCG GTACCGGCCT GCCCACGATG
CCCTCCACAC ACCAGATCGT GCGCGGAGTC GAGGCGACAG CCCGGGTCGC CTACGTCGAC
AACGACCCCA TCGTGCTGTC CCACGCACGG GTCCTGCTCA CCGACGGCGG TCCCGGCACC
GCATTCGTCG AGGGGGACCT GCGCGAACCC GAGGCACTCC TGCGCGACCC GGTCCTGACC
GCACTGATCG ACTTCAACGA ACCGGTGGCC ATGATCGCCA CCGGCCTCCT GCACTTCCTG
CTCGACCACG AACAACCCGC CAAGCATCTG CGCACCCTCA TGGACGGCTG CCCCCCGGGC
AGCTGTCTGG TCCTCACCCA CGGCGCCACC GACCTCGCCG TCGAGCTGGC CCGCGCCACC
GCCGCCGCCT TCCGCCAGTC GACGATCCCG TGCCAGGCAC GCAGCCGCGA CGAGGTCCTG
GAGCTCCTGG GCGATTTGCA GCCGCTGGAA CCGGGACTGG TGCCGATGGC GGCGTGGTGG
AACGAAGGTC CGGTGACGAA GGCGGTGCGA GAGCGGCAGA TCGCTTACGG GGTCGTGGCG
CGGAAGAAGT AG
 
Protein sequence
MADHEGLGGP LPPLFDAPQP RRPAALDTDS PHVARLYDFL LGGKDHFRAD RAAAELLLRA 
NPYLRDTCRE QRDFLRRALV RLATVGVRQF VDIGTGLPTM PSTHQIVRGV EATARVAYVD
NDPIVLSHAR VLLTDGGPGT AFVEGDLREP EALLRDPVLT ALIDFNEPVA MIATGLLHFL
LDHEQPAKHL RTLMDGCPPG SCLVLTHGAT DLAVELARAT AAAFRQSTIP CQARSRDEVL
ELLGDLQPLE PGLVPMAAWW NEGPVTKAVR ERQIAYGVVA RKK