Gene Caci_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5354 
Symbol 
ID8336708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6170079 
End bp6171071 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID644958452 
Productaldo/keto reductase 
Protein accessionYP_003116054 
Protein GI256394490 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.6083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTACA CGATCTTCGG CGGTTCGAAC GGACCGCGGG TGAGCACGCT GGCGCTGGGC 
ACGATGATGT TCGGCACGAA AATCGACGAG ACGACCTCGT TCGCGATCCT GGACCGCTTC
CGCGAAGCGG GCGGGACCTT CCTGGACACC GCGGACTGCT ATGCCTTCTG GGTCGAAGGT
GCCACCGGGC ACGAGAGCGA GGAGCTGGTG GGCCGGTGGC TGGCGGCGCG CGGCTGCCGC
GAGGAGATGG TGATCTCGAC CAAGCTCGGC GCGCAGCCGA ACCCGGAGTT CGGGACCGTC
TGGCCGCGCA ACGCCGAAGG GCTTTCGGCG CCGGCGATCC GGGCGGCGGT GAAGGGCAGC
CAGGCGCGGC TCGGCACCGA TCACCTCGAG GTGCTGTTCT CCCACATCGA GGACCAGTCC
GTGACGTTCG AGGAGACGGC CGCCGCGTAC GCCGAGCTGA TCGCGCAGGG CACGGTGGCC
GTCGCCGGCG TCTCGAACCA CCCGACGACG CGTGTGAAGA GGGCGCGCGC CGCAGCCGGG
CAGCTGGGCG TCCCGGGCTA CACGGCGGTC CAGCAGCGCC ACGGCTACCT GCGCGCGCTG
CCCGGCGCCA GCTTCACCTC GCCGCAGGAG CCCGCCGACG ACGAGCTGCT GGGGATAGTG
CGCTCCGGCG AGGTGTCGAT GATGGCGTAC GCCTCGCTGC TGGAGGGCGC GCTGGTCCGC
GAGGACCGTC CGCTGCCGGC GCAGTATCAG AGCCCGGAGA ACGAGCTGCG CGTCAAGGCT
CTGTGGCACG CCGCCGACCA GGCCGGGGTG ACGCGGACGC AGCTGGCGCT GGCGTGGCTG
CTCAAGGACG AGCCGGCGAT CGTGCCGGTG CTCGGCGTGA GCTCGGTGGC GCAGCTCGAC
GACGGGCTCG GGGCGTTGGA CGTGTCGCGC GACGTGGTCA CGGCACTGGC TGACACATTG
GCTGACACGC TAGCCGAGAC GCAGGACAAG TAA
 
Protein sequence
MEYTIFGGSN GPRVSTLALG TMMFGTKIDE TTSFAILDRF REAGGTFLDT ADCYAFWVEG 
ATGHESEELV GRWLAARGCR EEMVISTKLG AQPNPEFGTV WPRNAEGLSA PAIRAAVKGS
QARLGTDHLE VLFSHIEDQS VTFEETAAAY AELIAQGTVA VAGVSNHPTT RVKRARAAAG
QLGVPGYTAV QQRHGYLRAL PGASFTSPQE PADDELLGIV RSGEVSMMAY ASLLEGALVR
EDRPLPAQYQ SPENELRVKA LWHAADQAGV TRTQLALAWL LKDEPAIVPV LGVSSVAQLD
DGLGALDVSR DVVTALADTL ADTLAETQDK