Gene Caci_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5352 
Symbol 
ID8336706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6168402 
End bp6169598 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content71% 
IMG OID644958450 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003116052 
Protein GI256394488 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.57271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.485306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGC ACGGCATCAA GGACCGCGTC GCGATCGTCG CGATGGGCTG CACCCGCTTC 
ACAGAGCATT GGGACAGCGG CGCCGACGAG CTCCTGCTGT CCGCGACCGC CGAAGCCTTC
GCTGGCGCCG GTCTGGCCAA GGAGGAGATC GACGCCTACT GGCTCGGGAC CGCGCAGTCC
GGCATGAGCG GCATCACCCT GGCGCGTCCC CTGGAGCTGG AGGGCAAGCC GGTCACCCGC
GTCGAGAACT ACTGCGCGAC CGGCTCCGAA GCCCTGCGGC AGGCCGCCTA CGCCGTCGCC
TCAGGCGCCT ATGACGTGGC GATGGCGGTC GGCGTCGAGA AGGTCAAAGA CTCCGGCTAC
CAGGGCCTGA ACGCCTTCCC CATCCCCGGT GACGGCACCG CCCGCACCGT CACCGCAGCC
GCGATGTTCT CGATGGTCGT CCCCGCCTAC GGCGCCAAGT ACGGCGTCGC CCCGCAGGAG
ATGCGCGAGG TCCTGGCCCG CATCGCCGCC AAGAACCACG CCAACGGCGC GCGCAACCCC
AAGGCGCAGT TCCGCAAGGA ATGGCCGGTC GAGCAGCTGC TCGCCATGCC GCGCGTCGCC
GGAGAGCTGT CCGTGTTCGA CTGCGCCGGA GTCGCCGACG GAGCGGCGGC GGCGATCGTC
GTCCGCGCCG AGGACGCCCT GCGCTACACC GACAAACCGC TCTACATCAA AGCCCTGTCA
CTGGTCGCGG GCAACGGCCT GCCCCTGGGC GACCCCGGCT ACGACTACAC GACCTTCCCC
GAGATCGTCG CCGCCGCCGA GGACGCCTAC CGCCAGGCCG GCGTCGCCGA CCCGCGCCGC
GAGCTGGCGA TGGCCGAGGT CCACGACTGC TTCACCCCCA CCGAGCTGGT CCTGATGGAG
GACCTGGGCT TCTGCGAACG CGGCAAGGCC TGGCAGGAGG TGCTGGCCGG GGCGTTCGAC
CTCGACGGCG ACCTGCCGGT CAACCCCGAC GGCGGGCTGA AGTCGTTCGG CCACCCGGTC
GGCGCCTCCG GGCTGCGCAT GATGTACGAA GCCTGGCTCC AGCTGCGCGG CGAGGCGCCG
GAGCAGCGGC GGATCAGCAC GTTCGGGCAG CGGGAGCTGG CGCTGACGCA CAATCTCGGC
GGATATCCGG GCGAAATGGT GGGCTTTGTA TCGATTCTGG GAACCCGTCA AGGCTGA
 
Protein sequence
MASHGIKDRV AIVAMGCTRF TEHWDSGADE LLLSATAEAF AGAGLAKEEI DAYWLGTAQS 
GMSGITLARP LELEGKPVTR VENYCATGSE ALRQAAYAVA SGAYDVAMAV GVEKVKDSGY
QGLNAFPIPG DGTARTVTAA AMFSMVVPAY GAKYGVAPQE MREVLARIAA KNHANGARNP
KAQFRKEWPV EQLLAMPRVA GELSVFDCAG VADGAAAAIV VRAEDALRYT DKPLYIKALS
LVAGNGLPLG DPGYDYTTFP EIVAAAEDAY RQAGVADPRR ELAMAEVHDC FTPTELVLME
DLGFCERGKA WQEVLAGAFD LDGDLPVNPD GGLKSFGHPV GASGLRMMYE AWLQLRGEAP
EQRRISTFGQ RELALTHNLG GYPGEMVGFV SILGTRQG