Gene Caci_5345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5345 
Symbol 
ID8336699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6160343 
End bp6160957 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID644958443 
Productguanylate kinase 
Protein accessionYP_003116045 
Protein GI256394481 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.313334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC GCGCCGGAAC GGACGGCCAC GGTTCCGACA CCTCAGCCCC TGCCCCCGCA 
CTGCTGACAG TGCTCTCGGG CCCGTCGGGC GTCGGCAAGA CGACCCTTGC CAAGCATGTG
CGCGAGGCCC ACCCCCAGGT GTGGCTGTCG GTCTCGGCCA CCACGCGAAC CCCCCGCCCC
GGCGAGGTGG ACGGCGTGCA CTACTTCTTC TACGACCGGC CCGCCTTCGA GGACCTGATC
GCCGAGGGCG CTTTCCTGGA GCACGCCGAG TACGCCGGCA ACCTGTACGG CACCCCGCGC
CGGGCCGTCG AGCAGCGCCT GGAAGCCGGC CAGCCCGTGC TGCTGGAGAT CGAGCTGCAG
GGCGCGCGCC AGATCCGCGC CGCGATGCCC GCCGCCCGCC TGGTCTTCCT GGCTCCGCCC
TCCTGGGAGG TGCTCGAGCA GCGGCTGCGC GGCCGCGGCA CCGAGCCGGA GGCCGTGATC
GCCGAACGCC TGGCCACCGG CCGGGTGGAA CTGGCCGCCG AGAGCGAGTT CGACGTCACC
ATCGTCAACA CCACGGTCGA GGCCGCCGCC GAGGAACTGG TCGAGCTGGT CACCGGTGCG
GGGTCCAGGG CCTGA
 
Protein sequence
MSDRAGTDGH GSDTSAPAPA LLTVLSGPSG VGKTTLAKHV REAHPQVWLS VSATTRTPRP 
GEVDGVHYFF YDRPAFEDLI AEGAFLEHAE YAGNLYGTPR RAVEQRLEAG QPVLLEIELQ
GARQIRAAMP AARLVFLAPP SWEVLEQRLR GRGTEPEAVI AERLATGRVE LAAESEFDVT
IVNTTVEAAA EELVELVTGA GSRA