| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5338 |
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| Symbol | |
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| ID | 8336692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6153424 |
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| End bp | 6154344 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958436 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003116038 |
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| Protein GI | 256394474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0218973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.666758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGG GCTTTCTGAC CGCCTGCCTG CCCCAGGTCC CGCTGGCGGA CATCGCCGCC
TGGGCCGCCG AAAACGATTA CGCCGCCTTG GAAGTCGCCG TCTGGCCGAA GGTCGGCGGG
CGCGAGTTCG AGGCCGGCCA CATCGACGTC GCGCACTTCG GCGCCGGACA GGCCGAGGAG
GTCACCGAGC TGTTCGCCAA GCACCGGCTG ACCCTGTCCT CGCTGGCGTA CTACGAGAAC
AACCTGCACC CGGACGAGGG ACGGCGCGAG GAGATCGCGG CGCACGTGCT GCACGCGGTG
GACGCCGCGG CGCTGCTCGG CGTGGAGACC GTCGGCACGT TCATCGGCCG GCACCCCGGT
CTGAGCGTGA AGGAGAACGT CGCGCTGGCC GAGCAGACCT TCCCGCGGCT GGTCGACTAC
GCCGGGGAGC GCGGCGTGAA GATCATCATC GAGAACTGCG TCATGGAGGG CTGGCACCCC
GACGGCTACC CCGGCAACAT CGCCTACTCC CCCGAGCTGT GGGAGTGGAT GTTCTCGCTC
GGGCTCTACC TGAACTACGA CCCCTCGCAC CTGCTGTGGA TCGGGATCGA CCCGGTGACC
GCGCTCAAGC CCTACGTCGA CCGCATCCCG CACGCGCAGG CCAAGGACAC CCAGCTGGAC
CCGCTGGCGC GCGACCGCTA CGGCTTCTTC GGCAAGACCC TGAGCCGGGA GCACCCCTGG
GACGAGGGCT GGTGGCGCTA CCGCGTGCCG GGCCTGGGGC AGGTGGACTG GAGCGGCGTG
GTGGACGCGC TGTACGAGGG CGGGTTCACC GGGGTGCTGA GCGTGGAGCA CGAGGACCCG
GTGTGGGGCG GCACCGAGGA GAAGGTCAAG CAGGGACTGC GGATCGCCCA CCGCACGCTC
TCGCCGCTCA TCGTCGGGTA G
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| Protein sequence | MKLGFLTACL PQVPLADIAA WAAENDYAAL EVAVWPKVGG REFEAGHIDV AHFGAGQAEE
VTELFAKHRL TLSSLAYYEN NLHPDEGRRE EIAAHVLHAV DAAALLGVET VGTFIGRHPG
LSVKENVALA EQTFPRLVDY AGERGVKIII ENCVMEGWHP DGYPGNIAYS PELWEWMFSL
GLYLNYDPSH LLWIGIDPVT ALKPYVDRIP HAQAKDTQLD PLARDRYGFF GKTLSREHPW
DEGWWRYRVP GLGQVDWSGV VDALYEGGFT GVLSVEHEDP VWGGTEEKVK QGLRIAHRTL
SPLIVG
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