Gene Caci_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5327 
Symbol 
ID8336681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6141823 
End bp6142974 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID644958425 
Productpeptidase M24 
Protein accessionYP_003116027 
Protein GI256394463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.445473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCC GCGCGGCCAC TATCCTGACC CTCGTGACAC ACCACACACA TGATCTGACC 
GACCGCCTGG CCCGCGCCCA AAAGGCTGCC GCCGAGGCCG GTATGGACGC CCTCCTGATC
AGCCCTGGTG CCGACCTGCG CTACCTGACC GGCTACGAGG CGCTGCCGCT GGAGCGGCTG
ACCTGTCTGG TTCTGCCCGC GAGCGGCGAC CCCCTGATGG TCGTCCCGGC CCTGGAGAAG
CCCGCCGCCG AGGCCTCGCC CCTGGGCGGC CTCGGGCTGG ACATCCTGGC CTGGGCCGAG
ACCGACGATC CCTACGCGCT GGTGGCCTCG CGGCTGCCGG GCTCGGCACG GACCGTCGGG
CTGGACAACC ACATGTGGGC CGAGAAGGTC CTGAACTTCC GGCGCGTGCT GCCGGACGCC
GAGCAGGCAC TGGCCGGCGA GGTGCTGGGC GACCTGCGCA TGCGCAAGAC CGCGGCGGAG
GTGGAGTCCC TGCGTGCGGC GGCGGCCGCC ATCGACTCCG TGCACCGCCG GGTGCCCGAG
TGGCTGCGGC CCGGGCGCAC CGAGCGCGAG GTCGGGCAGG ACATCGCCGA CGCGATCCTG
GCCGCCGGGC ACGTCACGGT CGACTTCGTG ATCGTCGGCT CCGGCCCGAA CGGCGCCTCC
CCGCACCACG AGCTCTCCGA CCGCGTGATC CAGGCCGGGG ACCAGGTCGT CGTCGACATC
GGCGGAGCCA TGCCCGACGG CTACTGCTCG GACTCCACGC GCGACTACAG CCTCGGCGCG
CCCTCGGCGG AGTACGCCGA ATACTTCGCG GTCCTGCTGG CCGCGCAGAA GGCGCAGTGC
GACGCCATCC GCCCCGGCAT CACCGCCGAG GAGTTGGACG CCGTCGGCCG CGACCTGATC
ACCGCCGCCG GCTACGGCGA GCAGTTCATC CACCGCACCG GCCACGGCAT CGGCCTGGAG
ACGCACGAGG AGCCGTACAT CGTCTCCGGT TCCGCGCGTC CGCTGGAGCC CGGCATGGCC
TTCTCCATCG AGCCCGGCAT CTACCTCGCG GGCAAGCACG GCGCGCGCAT CGAGGACATC
GCGGTGTGCA CCCAAGACGG CGGCGAGCGC CTCAACCTGA CCACCCGCGA GCTCGTGGTG
GTGGACCTCT GA
 
Protein sequence
MDLRAATILT LVTHHTHDLT DRLARAQKAA AEAGMDALLI SPGADLRYLT GYEALPLERL 
TCLVLPASGD PLMVVPALEK PAAEASPLGG LGLDILAWAE TDDPYALVAS RLPGSARTVG
LDNHMWAEKV LNFRRVLPDA EQALAGEVLG DLRMRKTAAE VESLRAAAAA IDSVHRRVPE
WLRPGRTERE VGQDIADAIL AAGHVTVDFV IVGSGPNGAS PHHELSDRVI QAGDQVVVDI
GGAMPDGYCS DSTRDYSLGA PSAEYAEYFA VLLAAQKAQC DAIRPGITAE ELDAVGRDLI
TAAGYGEQFI HRTGHGIGLE THEEPYIVSG SARPLEPGMA FSIEPGIYLA GKHGARIEDI
AVCTQDGGER LNLTTRELVV VDL