Gene Caci_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5321 
Symbol 
ID8336675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6135802 
End bp6136251 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID644958419 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003116021 
Protein GI256394457 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATA TCGACAGGCA CATCGTGGCG GCCCTGGTCG CCGACGGCCG GATGAGCTAC 
ACCGACCTCG GCAAGCTGAT CGGGTTGTCG ACCTCGGCGG TGCACCAGCG GGTGCAGAAG
CTGGAGGAGC GCGGCGTGCT GCGGGGATTC CGGGCCGTGG TGGACCCCGA GGCGCTGGGC
TTGAGCCTGA CGGCGTTCAT CTCGGTCAAG CCCATCGACC CGGCGGCGCC GGACGACGTG
CCGGACCGGC TCAAGGGTCT GGAAGAGGTC GAGGACTGCT ACAGCGTCGC CGGGGACGAG
AACTACATCC TCAAGGTGCG CGTCGGCACG CCGGGCCAGC TGGAGTCCCT GCTGTCCCGG
ATCCGCACCG CGGCCGAGGT GTCCACCCGG ACCACGGTCG TCCTGTCCAC GCCGTTCGAG
GCCCGGATGC GCGGGACGAC GCCGGCCTGA
 
Protein sequence
MDDIDRHIVA ALVADGRMSY TDLGKLIGLS TSAVHQRVQK LEERGVLRGF RAVVDPEALG 
LSLTAFISVK PIDPAAPDDV PDRLKGLEEV EDCYSVAGDE NYILKVRVGT PGQLESLLSR
IRTAAEVSTR TTVVLSTPFE ARMRGTTPA