Gene Caci_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5312 
Symbol 
ID8336666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6123236 
End bp6125113 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content71% 
IMG OID644958410 
Producthypothetical protein 
Protein accessionYP_003116012 
Protein GI256394448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.211703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCGG CGACAGCGGC GGCGGAGGTG CCGACGGCGG CGGAGGAGGC GGAGGAGGCG 
GCGGAGGTGG CGGCGGAGGC GGCGGAGGTG GCGGCGGAGG AGGTGGCGGC GGCGGAGGAG
GTGGCGGCCG CGGCGGCGAA GGTGCCAGTG GCGGTGGCGG TATCGGTGAC ATCGGCGATG
CCGGCGCTTT CGGTGACATC GGTGTTCGAG GATTTCGTGC GTGTCGCCAC CGGTCACCAG
CCGTCTGCTG CTCAGATGAG GCTCGCTGCG GATGGGTTGC CGGAGGTCGT CGAGATCGCC
GCGGGCACTG CCGGCGAGGA GCGGGTCGAG ACCGCCGTGT TGCCGTGGCT CCATCGGCGG
ATGGTCTCGG CGCCGGAAGC CACGCCGAGG CGGCTGGTCT ACGTCGTGCC GATGCATGGT
CCCGTCGAGG AGGTGTTCGC GCGGATCGGT GAGTGGCTGG CGCGGCTTGG GCTCGCCGAG
GACGTCGGTC TGCATCTGGT CGCTGGCGCG GCTCCGGGCA GCGGGTGGCA GCGTCGGCCG
GAGGAGTCCG CGATTCTGGT CGGGACGCCG GACCTGTTGC TGAGCAAGGC GCTCATGCGC
GGGTTCGGCG ACTCGGCGCA GAACGCTCCG GTGTCGTTCG GGCTGCTGAA CAACGGTGTG
CAGTGGGTCT TCGAGGACGC GCGGCGGCTC GGTCCCGGGT TGGCGACGAG CGTCGAGCTG
CAACGGCTGC GTGATCTGCT GGGGACGGCG GCGCCTGCTC GCAGCACCTG GTTGTCCGAT
GCCCCGCATC TGCTTGAGAC GGCCGGCGCG ACTGTCCCGA GGTTGGATCG GGACGCTCTG
CGCACGCTGT TCGACACCAC CGTCGAGCCG AGCGGTGTCG GCGTTGCGCG CCTGGTCTGC
GACCAGGCCG ACTGGACCGT GCAGATCGCG CGGCGCAACT GGGAGTCCAC GCCGTCCGAG
GAGGAGCCCC GTCTACGCGG GGACGAGCTC CGCCGTGTGC CGCTCGCCGA CGTGCGGCAG
ATGCTCGGCG CGGGGATGTG GTTCTGGATC CGGGACCGGC TGGACGGTGC GTGGCGGCAC
GCGGTCGCCG AGGACCTCAC GCCCGGCGTC ACACTGGTGC GGCACGACCC CGAGGCCGGA
CCGGCGCAGG ACGCCGCGCC GTGGGCGTTC GCCTGCACCG CGTGGGTCAG TCTCGACCAG
CACCTGATGG AGACCGAGGA GGAGGCGCGC GACCTCCTGG ACTCGCTGCC CGGACTGCTG
GCGGACCAGC AGGAGGCTGT CAGGCTGGCG GCGCGCTATC ACGATCTCGG CAAGTGCCAC
GACGTATTCC AGGAGATGTT GCGAGGTGGT GGCGGCGATC CGCCCGACTA CCTGCTGGCC
AAGTCGAAGG CGCCATTCAG CACCGGTCAG AGGAGAAGGG CGTACTTCCG GCATGAACTC
GTCAGCGCGC TGATCTTGAT GGAGGGCGGC CATCCCTGGC TGACGACCTA CCTCGTCGCC
GCGCACCACG GGCACGTGCG CGTCTCGGTG CGGCCGGGGC GGGACGAGGC ACCGCTCATC
CTGGGTGTCC TCGACGGGGA TCAGATTCCG CCGATCGAGT TGTCGACCGG TGAGCGCTTC
CCCGCGCAGC GCCTTCAGAC CACGGACATC GAGCCTGGCG GAGGGTGGAC GGAGCGAGTG
CTGGCGCTGG TGGACCGCGA AGATCTCGGA CCCTTCAGGC TCGCCTACCT CGAGACGCTG
GTCCGCGTAT CCGACTGGCG GTCCAGCGCG CGCCATGACG GTCCGGTCGA AGCGCTCGCG
CCCGCGCTGC CCGCGACCCC GGCCGCGCTC AGTCCCGAGG CTGCTTCTTC TCCGTCGGCA
GCGGCGCTCC CCCGCTGA
 
Protein sequence
MTSATAAAEV PTAAEEAEEA AEVAAEAAEV AAEEVAAAEE VAAAAAKVPV AVAVSVTSAM 
PALSVTSVFE DFVRVATGHQ PSAAQMRLAA DGLPEVVEIA AGTAGEERVE TAVLPWLHRR
MVSAPEATPR RLVYVVPMHG PVEEVFARIG EWLARLGLAE DVGLHLVAGA APGSGWQRRP
EESAILVGTP DLLLSKALMR GFGDSAQNAP VSFGLLNNGV QWVFEDARRL GPGLATSVEL
QRLRDLLGTA APARSTWLSD APHLLETAGA TVPRLDRDAL RTLFDTTVEP SGVGVARLVC
DQADWTVQIA RRNWESTPSE EEPRLRGDEL RRVPLADVRQ MLGAGMWFWI RDRLDGAWRH
AVAEDLTPGV TLVRHDPEAG PAQDAAPWAF ACTAWVSLDQ HLMETEEEAR DLLDSLPGLL
ADQQEAVRLA ARYHDLGKCH DVFQEMLRGG GGDPPDYLLA KSKAPFSTGQ RRRAYFRHEL
VSALILMEGG HPWLTTYLVA AHHGHVRVSV RPGRDEAPLI LGVLDGDQIP PIELSTGERF
PAQRLQTTDI EPGGGWTERV LALVDREDLG PFRLAYLETL VRVSDWRSSA RHDGPVEALA
PALPATPAAL SPEAASSPSA AALPR