Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5312 |
Symbol | |
ID | 8336666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6123236 |
End bp | 6125113 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958410 |
Product | hypothetical protein |
Protein accession | YP_003116012 |
Protein GI | 256394448 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.211703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATCGG CGACAGCGGC GGCGGAGGTG CCGACGGCGG CGGAGGAGGC GGAGGAGGCG GCGGAGGTGG CGGCGGAGGC GGCGGAGGTG GCGGCGGAGG AGGTGGCGGC GGCGGAGGAG GTGGCGGCCG CGGCGGCGAA GGTGCCAGTG GCGGTGGCGG TATCGGTGAC ATCGGCGATG CCGGCGCTTT CGGTGACATC GGTGTTCGAG GATTTCGTGC GTGTCGCCAC CGGTCACCAG CCGTCTGCTG CTCAGATGAG GCTCGCTGCG GATGGGTTGC CGGAGGTCGT CGAGATCGCC GCGGGCACTG CCGGCGAGGA GCGGGTCGAG ACCGCCGTGT TGCCGTGGCT CCATCGGCGG ATGGTCTCGG CGCCGGAAGC CACGCCGAGG CGGCTGGTCT ACGTCGTGCC GATGCATGGT CCCGTCGAGG AGGTGTTCGC GCGGATCGGT GAGTGGCTGG CGCGGCTTGG GCTCGCCGAG GACGTCGGTC TGCATCTGGT CGCTGGCGCG GCTCCGGGCA GCGGGTGGCA GCGTCGGCCG GAGGAGTCCG CGATTCTGGT CGGGACGCCG GACCTGTTGC TGAGCAAGGC GCTCATGCGC GGGTTCGGCG ACTCGGCGCA GAACGCTCCG GTGTCGTTCG GGCTGCTGAA CAACGGTGTG CAGTGGGTCT TCGAGGACGC GCGGCGGCTC GGTCCCGGGT TGGCGACGAG CGTCGAGCTG CAACGGCTGC GTGATCTGCT GGGGACGGCG GCGCCTGCTC GCAGCACCTG GTTGTCCGAT GCCCCGCATC TGCTTGAGAC GGCCGGCGCG ACTGTCCCGA GGTTGGATCG GGACGCTCTG CGCACGCTGT TCGACACCAC CGTCGAGCCG AGCGGTGTCG GCGTTGCGCG CCTGGTCTGC GACCAGGCCG ACTGGACCGT GCAGATCGCG CGGCGCAACT GGGAGTCCAC GCCGTCCGAG GAGGAGCCCC GTCTACGCGG GGACGAGCTC CGCCGTGTGC CGCTCGCCGA CGTGCGGCAG ATGCTCGGCG CGGGGATGTG GTTCTGGATC CGGGACCGGC TGGACGGTGC GTGGCGGCAC GCGGTCGCCG AGGACCTCAC GCCCGGCGTC ACACTGGTGC GGCACGACCC CGAGGCCGGA CCGGCGCAGG ACGCCGCGCC GTGGGCGTTC GCCTGCACCG CGTGGGTCAG TCTCGACCAG CACCTGATGG AGACCGAGGA GGAGGCGCGC GACCTCCTGG ACTCGCTGCC CGGACTGCTG GCGGACCAGC AGGAGGCTGT CAGGCTGGCG GCGCGCTATC ACGATCTCGG CAAGTGCCAC GACGTATTCC AGGAGATGTT GCGAGGTGGT GGCGGCGATC CGCCCGACTA CCTGCTGGCC AAGTCGAAGG CGCCATTCAG CACCGGTCAG AGGAGAAGGG CGTACTTCCG GCATGAACTC GTCAGCGCGC TGATCTTGAT GGAGGGCGGC CATCCCTGGC TGACGACCTA CCTCGTCGCC GCGCACCACG GGCACGTGCG CGTCTCGGTG CGGCCGGGGC GGGACGAGGC ACCGCTCATC CTGGGTGTCC TCGACGGGGA TCAGATTCCG CCGATCGAGT TGTCGACCGG TGAGCGCTTC CCCGCGCAGC GCCTTCAGAC CACGGACATC GAGCCTGGCG GAGGGTGGAC GGAGCGAGTG CTGGCGCTGG TGGACCGCGA AGATCTCGGA CCCTTCAGGC TCGCCTACCT CGAGACGCTG GTCCGCGTAT CCGACTGGCG GTCCAGCGCG CGCCATGACG GTCCGGTCGA AGCGCTCGCG CCCGCGCTGC CCGCGACCCC GGCCGCGCTC AGTCCCGAGG CTGCTTCTTC TCCGTCGGCA GCGGCGCTCC CCCGCTGA
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Protein sequence | MTSATAAAEV PTAAEEAEEA AEVAAEAAEV AAEEVAAAEE VAAAAAKVPV AVAVSVTSAM PALSVTSVFE DFVRVATGHQ PSAAQMRLAA DGLPEVVEIA AGTAGEERVE TAVLPWLHRR MVSAPEATPR RLVYVVPMHG PVEEVFARIG EWLARLGLAE DVGLHLVAGA APGSGWQRRP EESAILVGTP DLLLSKALMR GFGDSAQNAP VSFGLLNNGV QWVFEDARRL GPGLATSVEL QRLRDLLGTA APARSTWLSD APHLLETAGA TVPRLDRDAL RTLFDTTVEP SGVGVARLVC DQADWTVQIA RRNWESTPSE EEPRLRGDEL RRVPLADVRQ MLGAGMWFWI RDRLDGAWRH AVAEDLTPGV TLVRHDPEAG PAQDAAPWAF ACTAWVSLDQ HLMETEEEAR DLLDSLPGLL ADQQEAVRLA ARYHDLGKCH DVFQEMLRGG GGDPPDYLLA KSKAPFSTGQ RRRAYFRHEL VSALILMEGG HPWLTTYLVA AHHGHVRVSV RPGRDEAPLI LGVLDGDQIP PIELSTGERF PAQRLQTTDI EPGGGWTERV LALVDREDLG PFRLAYLETL VRVSDWRSSA RHDGPVEALA PALPATPAAL SPEAASSPSA AALPR
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