Gene Caci_5309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5309 
Symbol 
ID8336663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6117925 
End bp6118497 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content75% 
IMG OID644958407 
Productputative secreted protein 
Protein accessionYP_003116009 
Protein GI256394445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGGT TCGTGAAGAA GGGTCTGCTG CTGTCGCTGG CCGCGGGCTC GATGATGGTC 
GCCGGCGCCG GTGCGGCCGC CGCGGCCGAC TCGGCGGCCA CCGACGGCGC CGCCGCCGAC
AGCCCCGGCC TGGCCTCCGG CAACGTGGCG CAGGGTGCGG CCGACGTGCC GGTGCAGGTG
TGCGGCGACG CCGGGGCGGC GGGCGCGGCG TTGATCGACG CTCTGGAGAA CCGCTGCACG
ACCTGGGACA ACCGCTCCTC GGTGCGCGGC GTGGCCGCGA ACAGCCCCGG CGCGGTGTCC
GGGGACGTCG TCGGCGGCGC GCTGAACGCC CCGGTGCAGG GCTGCGGCCT GAGCGGGACG
GTCGCCGGCG CGCAGTCCGA CGCCGCCGGG AACAGCTGCG ACGACGTGCG CACCGCGGCG
AGCGCGGTCG GCGCCACCTC GAACGACCCG GGCGCGGTGT CCGGGGACGT GGTTCAGGCC
TCTGTCAACA CCCCGATCCA GGTGTGCGGC GACGCGGTAT CGGTCGGCAG CTTCAACACC
GGCGCCGAGG ACAACCACTG CGTGAACAGC TGA
 
Protein sequence
MHGFVKKGLL LSLAAGSMMV AGAGAAAAAD SAATDGAAAD SPGLASGNVA QGAADVPVQV 
CGDAGAAGAA LIDALENRCT TWDNRSSVRG VAANSPGAVS GDVVGGALNA PVQGCGLSGT
VAGAQSDAAG NSCDDVRTAA SAVGATSNDP GAVSGDVVQA SVNTPIQVCG DAVSVGSFNT
GAEDNHCVNS