| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5301 |
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| Symbol | |
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| ID | 8336655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6108888 |
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| End bp | 6111581 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644958399 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003116001 |
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| Protein GI | 256394437 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTT CTGCCACGGA CCGGCTCGCG CTTGCTCTGA GCGCTCTGGA TCAGGTGCTG
GCCCAGCCCG CCGCGGGCAG AGCCGAGGCC GAGGCGGTGC TGGCCGGCGG GGACGATGAC
GAGGCGGCGG CGATAGCCCT GCGCGCGATC GGCTTGTCGT GGAAGGAGAA CGGCGACCTG
GCGCGCGCGG CCAAAGCCCT GCGACGCGGC GTCGCCGTCG CGGAGAAGGG CGGGCTGGCC
TATCGGGCCG CCGAGGCCCG GATGTCGCTG GTGGTGATCC TGGCCGACCG CGGCAACACC
GAGGGCGCGC TGGCCGAGGC GGCGCTGGCC GACAGCATCC TGACCGGTCT GGACCGGGCT
CGGCTGCGCG TGAACCTCGC GCTGGTCCTG GGCCGGATCG GGCGGACCGC CGAGGCGCTG
GACGCCCTGG ACTCCAGCCA GCCGGTGCTG GCCTCCTACG GCGATGCCCG GTGGGAGGCG
ATCGCGTTGA ATCTGCGCGG GATCATCCAG GTCTACCGGG GCGCCGGGCA GCCGGCTCAG
TCCGACCTGC TGCGCGCCGC GCGGCTGACC GAGGACGGCG GCTACCGGCT GCTGAACGCG
ATCGTGTTGG GCAACCTGGG CTTCGCCGCG CATCGCGCCG GCGACCTGCC CTCGGCGCTG
TACTGGTTCG ACGCCGCCGT CGAGCGGTTC GCCGAACACG ACAAGCCGGT GGCGCCGATG
CTCGTGGACC GCGCCGAGGC GCTGCTCACG GCCGGACTGA GCACCGAGGC GCACACCACG
CTGCGCCAAG CGATCGCCGA GCAGGAGCGC AGCGGCTTCG GCTACGACCG CGCCGAGTAC
CACCTGATCT GGGCCCGAGC CGCACTGGCC GACGGCGACC CGACCGCGGC CGAGGACGCC
GCGCGCACCG CCCGCGGCAT GTTCGGGCGG CAGCGCCGGG CGGCCTGGGC GGACCTGGCG
CGGCACGTCG AGGCCTCGGC CCGGTTCGCG ACCGGCGAGC GCAGCCCGGC GCTGTTGAAG
ACGGCGGTGG AACTGGCCGA TCGGATGGCC GCGGCGAAAT GGCCGGTGAC GCCGCTGGAG
GCCCGGCTGC TGGCCGGCCG GATCGCCTTC GCCCTCGATC GCCGCGAGCA GGCGCTGGCG
TTGTTCGAGC AGGTGGCGCG GCATCGGAAC CGGCGGGAGG CCGAGGTCAG GATCCTGGCT
TGGCACGCGC ACGCGCTGCA CGCGCTCACC GCCGGACGCG CCTCGGCTGC CGAACGGGCT
TTGCACGCGG GGTTGCGCGT GCATCAGGAG AACAACGCTG TCCTGGGCGC CACCGATCTG
CGCGCGCACG CCGCCGCGCG GGGCGAGGAG TTGGCGAAGC TCGGACTGCA GCTGGCTTTG
AAGCGCGGCG ATGCCCGCGC GGTCCTGCGC TGGGCCGAGA CCTGGCGTGC GGCGTCGTTG
CGGCGGCGGC CGGTGCGCCC GCCGGACGAC GAGCAGCTCG CCGCTGACTT GGCGGAGCTG
CGGCGGGTGG TGGCGGAGCT GGCGGCGGTG GAGGCGCCGA CAGCGCGCGG GTCGGCGCGG
ACGGAGGTGT CGCGGCTCAA TGGCGAGCGC TTGCGGTTGG AAGCGGCGAT TCGGGATCGG
TCGCGGTATG CGCGCGGGAC CTATGCGCCG GAGCCGCCCT TCTCCCCTGC CACGTTGGCC
GGGGCGCTGG GGACGCGCGT GCTGGTGGAG TTCATGCGGT TGGACGACGA CCTGCACGCG
GTGACGGTGC GGGACGGGGT GGTGCGGCGG CATCGGCTGG GGTCGTACGC GGCGGTGCTG
CGGCAGTTGG ACGTGGTGCG GTTCGCGATG AACCGGATGT CGCGGCGGTT CGGGTCGGCG
GCGATGCAGG ACGCGGCGGT GGAGGCCTAC GACCACAGCC GGCGGGAGCT CGACGCGTTG
CTGTTCGGGC CGGTGCGGGG GTCTTTGGAC GGAGTCGGCG GTGTCGCCGA CCGGCCGTTG
ATCGTCGTGC CGACCGGGTC GCTGCACGCG TTGCCGTGGA CGGCGCTGCC GACGTGTGCC
GGGCGCGCGG TGAGCGTCAC GCCGTCGGCA CGGCTGTGGC TGGCGGCGGC CAACGCCGCC
GGTGCTGCGG AGAGCGCCGC CAGCGCTGCC GGGTCCGAAG CCCTGGCCAC GTCGTCGACC
GGCGTCGGGA CGGTGTTGAT GGCCGGACCC GGCCTGGCGC ACGCCGAGCC GGAGATCGCC
GCGTTGGCGG CGCGCTATCC GGACGCTGTC GTGCTGTCCG GAGCCGAGGC CACCGCCGCC
AACACCGCGC ACGCCCTGGA CGGCGCCGCG CTGGCGCACG TCGCCACGCA CGGCCGCTTC
CGGGCCGATC ATCCGCTCTT CTCCAGCCTG GACGCCTTCG ACGGCCCGCT GTACGTCTAT
GACCTGGAAC GGCTCGGCGC CACGCCGCAG ACGCTGGTGC TCTCGGCGTG CGAATCGGCG
CTGTCCGGCG TGCGGCCGGG AGACGAGCTG ATGGGACTCG CTTCGGCGGT CTTCGCCCTC
GGCACCCGCA CGCTGATCGC CAGCGTCACG CCGGTCGACG ACCGGGACAC CCGCACGCTG
ATGCTCGCGC TGCACGCCGA GCTGGCCTCC GGACACCCGG CCGCGGCGGC GCTCGCCGAG
GCGTCGGAGG CGACCGGGAT CGGCGGATTC GTGTGCTTCG GGTTCGGCGG CTGA
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| Protein sequence | MPSSATDRLA LALSALDQVL AQPAAGRAEA EAVLAGGDDD EAAAIALRAI GLSWKENGDL
ARAAKALRRG VAVAEKGGLA YRAAEARMSL VVILADRGNT EGALAEAALA DSILTGLDRA
RLRVNLALVL GRIGRTAEAL DALDSSQPVL ASYGDARWEA IALNLRGIIQ VYRGAGQPAQ
SDLLRAARLT EDGGYRLLNA IVLGNLGFAA HRAGDLPSAL YWFDAAVERF AEHDKPVAPM
LVDRAEALLT AGLSTEAHTT LRQAIAEQER SGFGYDRAEY HLIWARAALA DGDPTAAEDA
ARTARGMFGR QRRAAWADLA RHVEASARFA TGERSPALLK TAVELADRMA AAKWPVTPLE
ARLLAGRIAF ALDRREQALA LFEQVARHRN RREAEVRILA WHAHALHALT AGRASAAERA
LHAGLRVHQE NNAVLGATDL RAHAAARGEE LAKLGLQLAL KRGDARAVLR WAETWRAASL
RRRPVRPPDD EQLAADLAEL RRVVAELAAV EAPTARGSAR TEVSRLNGER LRLEAAIRDR
SRYARGTYAP EPPFSPATLA GALGTRVLVE FMRLDDDLHA VTVRDGVVRR HRLGSYAAVL
RQLDVVRFAM NRMSRRFGSA AMQDAAVEAY DHSRRELDAL LFGPVRGSLD GVGGVADRPL
IVVPTGSLHA LPWTALPTCA GRAVSVTPSA RLWLAAANAA GAAESAASAA GSEALATSST
GVGTVLMAGP GLAHAEPEIA ALAARYPDAV VLSGAEATAA NTAHALDGAA LAHVATHGRF
RADHPLFSSL DAFDGPLYVY DLERLGATPQ TLVLSACESA LSGVRPGDEL MGLASAVFAL
GTRTLIASVT PVDDRDTRTL MLALHAELAS GHPAAAALAE ASEATGIGGF VCFGFGG
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