Gene Caci_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5294 
Symbol 
ID8336648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6097981 
End bp6099891 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content66% 
IMG OID644958392 
Productheat shock protein 90 
Protein accessionYP_003115994 
Protein GI256394430 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.117014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGCC CCGTCGAGAC CCTGGAGTTC CAGGCCGAGA CCCGCCAGTT GTTGCAGCTG 
GTGATCCATT CGATCTACTC GAACAAAGAC ATCTTCCTGC GCGAACTGAT CTCGAACTCC
TCCGACGCCC TGGACAAGCT GCGCCTGGAA TCGCTGGTCG ACTCCGACCT CGAGGCCGAC
ACCTCCGACC CGCACATCGT GCTGGGCGTC GACCGGGACG CGCGCACCCT GACCGTCACC
GACAACGGGA TCGGCATGAC GCGCGCCGAG GTGGTGGACC TCATCGGCAC GATCGCCAAG
TCCGGGACGG CGGGTCTGCT GGAGCGGATC AAGCAGGCCA AGGATGCCGA GGCAGCGCAG
AGTCTGATCG GGCAGTTCGG TGTCGGGTTC TATTCGGCGT TCATGGTCGC GGACAAGGTG
AGCCTGCGTA CGCGCCGCGC CGGCACGACG GAGGGCACCC TGTGGGAGTC CGACGGCGAG
GGCAGCTATG AGATCTCCAG CGTCGATGAC TTGCCGGTCG GGACTACGGT CACGCTGCAC
CTCAAGCCCG CCGACGGCGA GGACGGGCTG GCGGACTACC TGGCCGACTG GAAGATCCGC
TCGATTGTGA AGCAGTACTC GGACTTCATC CGCTGGCCCA TCCGCATGGC GGTGGAGCGC
GGCGAGTCCG ACGGCGTCGC CGTCACCGAG ATGGAGACGC TGAACTCGAT GAAGGCGCTG
TGGGCGCGGC CGCGCAGCGA GGTCACCGAG GCGGAGTATC ACGAGTTCTA CAAGCAGATC
AGCCACGACT GGACCGATCC GGCCGAGATC ATCCACATGC GGTCGGAGGG GACGTTCGCC
TACGACGCGC TGCTGTTCAT CCCGTCCGCG GCGCCGTTCG ACCTGTTCTC GCAGCAGACG
AAGCGGGGCG TGCAGCTGTA CGTCAAGCGG GTGTTCATCA TGGACGACTG CGAGGCGCTG
GTCCCGAACT ACCTGCGCTT CGTCAAGGGC GTCGTGGACG CCCACGACCT GTCGTTGAAC
ATCTCCCGCG AGATTCTGCA GCACGACCGG CACATCCGCG GCGTGCGCCG TCGGCTGGTC
AAGAAGGTCC TGACCGCGAT CAAGGACATG CAGACCGGCA ACGCCGAGCA GTACGCGAAG
CTGTGGGACC AGTTCGGCCG GGTGTTGAAG GAAGGCCTGA TCGAGGACAC CGACAACACC
GAAGCGCTGC TGGATCTGAT CTCGGCCGAC TCCACCCACG ACGCGGAGAA GACCACGACG
CTGCGCGAGT ACGTGGAGCG GATGAAGGAC GGCCAGGACG CGATCTACTA CCTCACCGGC
GCCACGCGCG CCGCGGTCGA GAACTCCCCG CACATGGAGG CGTTCACCGC CAAGGGATAC
GAGGTCCTGA TCCTGACCGA CCCGGTCGAC GAGGTCTGGG TCGACCAGGT ACCGGACTTC
GACGGCCACC GCTTCCAGTC GATCGCCAAG GGCCAGGTCG ACCTGGACTC CGACTCCGAC
GAGAACGCCG ACGAGGAGAA GTCCAAGCGC GAAGCCGACT TCGCCGCCCT GCTCCCCTGG
CTGGCCGGCA CGCTGTCAGA CCACGTCAAG GCAGCCCGCC TCTCCTCCCG TCTGACCACC
TCAGCCGCAT GCGTCGTCGG CGACGCCCAA GACATGACCC CGATGCTGGA GAAGATGTAC
CGGGCCATGG GCCAGCAGAT CCCGCCAGTC AAACGCATCC TGGAGATCAA CCCGGCGCAC
CCCCTGATCA CCGCCCTCCG CGACGCCCAC GCCAAGAACG CCGAGGACAC GGCACTACCC
GACCTCGCCG AGATCATCCT CGGCACGGCG CTCCTCGCCG AAGGCGGCGA CCTGAGCGAC
CCGGCACGCT TCGCGCGGCT GCTGACCGAA CGGCTGGCTC GGACGCTGTA G
 
Protein sequence
MGSPVETLEF QAETRQLLQL VIHSIYSNKD IFLRELISNS SDALDKLRLE SLVDSDLEAD 
TSDPHIVLGV DRDARTLTVT DNGIGMTRAE VVDLIGTIAK SGTAGLLERI KQAKDAEAAQ
SLIGQFGVGF YSAFMVADKV SLRTRRAGTT EGTLWESDGE GSYEISSVDD LPVGTTVTLH
LKPADGEDGL ADYLADWKIR SIVKQYSDFI RWPIRMAVER GESDGVAVTE METLNSMKAL
WARPRSEVTE AEYHEFYKQI SHDWTDPAEI IHMRSEGTFA YDALLFIPSA APFDLFSQQT
KRGVQLYVKR VFIMDDCEAL VPNYLRFVKG VVDAHDLSLN ISREILQHDR HIRGVRRRLV
KKVLTAIKDM QTGNAEQYAK LWDQFGRVLK EGLIEDTDNT EALLDLISAD STHDAEKTTT
LREYVERMKD GQDAIYYLTG ATRAAVENSP HMEAFTAKGY EVLILTDPVD EVWVDQVPDF
DGHRFQSIAK GQVDLDSDSD ENADEEKSKR EADFAALLPW LAGTLSDHVK AARLSSRLTT
SAACVVGDAQ DMTPMLEKMY RAMGQQIPPV KRILEINPAH PLITALRDAH AKNAEDTALP
DLAEIILGTA LLAEGGDLSD PARFARLLTE RLARTL