| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5278 |
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| Symbol | |
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| ID | 8336632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6079905 |
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| End bp | 6081026 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958376 |
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| Product | rhamnose ABC transporter, periplasmic rhamnose- binding protein |
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| Protein accession | YP_003115978 |
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| Protein GI | 256394414 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.868799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG TCTTGAGGCG CGGCGCTCCG CGCTCGCGTC GGCGCCGTCC GCGCGTCGCC
GTGGCCCTGG CCGCGAGCGG CCTGCTGGCG CTGAGCCTGA GCGCATGCGG CGGAGCGACC
AAGAGCTCCA CCGACAAGGC GGCGTCCAGC GCACCGGCAG CGGGACAAAG CGGATCGGCG
AACCCGAGCG CGGCGGTCAA GAAGGGGCTG ACGGTCGCCT TCCTGCCCAA GCAGGTCAAC
AACCCCTACT TCAACATCTC CGACGCCGGT GGCAACACCG CGCTGACCGC CCTCGGCGAG
AGCTACAAAG AGGTCGGCAC GACCAGCGCC ACCGACACCG CGGGCCAGGT CTCGTACGTC
AATACCCTGA CGCAGCAGCA CGTCTCGGCG ATCGCCGTCT CCGCGCAGGA CCCCGGCGCG
TTGTGCACGG CGCTGAAGCA AGCGATGAGC GCGGGCATCA AGGTCGTCAC CTACGACTCG
GACACCGACC CCGGCTGCCG GCAGGCGTTC GTGTCCCAAG CCAGCTCCGA GGCGCTCGGC
CGCAGCGAGG TGGACCTGCT CGGCAAGGAG CTGAACTACA CCGGCCAGAT CGCCATCCTG
TCGGCGGCCC AGACCGCGAC CAACCAGAAC GCCTGGATCG GCTACATGCA GGACGAGCTG
AAGAAGCCGC AGTTCGCGAA CATGAAGCTG GTGAAGATCG CCTACGGCAA CGACGACGCG
CAGATGTCCT TCCAGCAGAC GCAAGGACTC CTGCAGCAGT ACCCGGACCT GAAGGGCATC
ATCTCCCCCA CCACGGTCGG CATCAAAGCC GCCGCACAGT ACCTGGACGG CTCGCAGTAC
AAGGGCAAGG TCCTGCTCAC CGGCCTCGGC ACACCGAACG ACATGCGCTC CTACGTCCAA
GACGGCACAG TGAAGGCCTT CGAGCTCTGG GACCCGGGCA AACTCGGCCA GCTCGCGGCC
TACGCGGCAG TGGCACTGGC CTCCGGCCAG ATCTCCGGCG CCCAAGGCCA AAGCTTCACC
GCCGGCCCGA TGGGGAACTT CACGCTCGGC GCACAGGGCG TCATCACGCT CGGGGCGCCG
ACGGTCTTCG ACGCGTCGAA CATCGGCCAG TTCAACTTCT AG
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| Protein sequence | MSTVLRRGAP RSRRRRPRVA VALAASGLLA LSLSACGGAT KSSTDKAASS APAAGQSGSA
NPSAAVKKGL TVAFLPKQVN NPYFNISDAG GNTALTALGE SYKEVGTTSA TDTAGQVSYV
NTLTQQHVSA IAVSAQDPGA LCTALKQAMS AGIKVVTYDS DTDPGCRQAF VSQASSEALG
RSEVDLLGKE LNYTGQIAIL SAAQTATNQN AWIGYMQDEL KKPQFANMKL VKIAYGNDDA
QMSFQQTQGL LQQYPDLKGI ISPTTVGIKA AAQYLDGSQY KGKVLLTGLG TPNDMRSYVQ
DGTVKAFELW DPGKLGQLAA YAAVALASGQ ISGAQGQSFT AGPMGNFTLG AQGVITLGAP
TVFDASNIGQ FNF
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