| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5274 |
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| Symbol | |
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| ID | 8336628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6073353 |
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| End bp | 6076046 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958372 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003115974 |
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| Protein GI | 256394410 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.340357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG TCCCGATCGC CCTGCTCGCG TTCGGCGTCG CGATCGGCGG TCTGAGCACC
GCCGTCGGCG ACCCGGCGCC GGCTCACGCA ACCGCGGCAC CCCATGCGCG GGCATCGCTT
CCGGCCGCCA AGCCCACGGC GACCGTCAAC CCCTGCGCCG CGGACAACCT GTCCCCCACC
TCGCGAACGG TCTCCCCGGT CTCGGTCTAC GCCACCTCCG GCACCGTCGG AAACGCTTCC
GCCGTCTTGA GCGGCCAGAA CACCCGGCTG ACCGGAAACG GCTCGGCCGT GACGCTGGAC
TTCGGCAAAG AGGTCGGCGG CATTGTGACG CTGCGCTTCG CCGACGCCAG CGATTCCAGC
CAAAGCGTCG GGCTGGCGTT CTCCGAGTCC AACCAGTTCG TCGGCAATGC CAGCGACGCC
TCCTCCGGCG GCGGCAGCGC GGACGGCGCG ATCACCACCG CGCTCCCGTC CGGCGGTGGC
AGCTACACCA TGCCGAAGGA CAAACTCCGA GGCGGATTCA GGTATCTGAC GCTCTTCCTG
AACTCCGGCG GCTACGCCGA TCTGGACGGC GTCTCCCTGG CGTTCAGCGC CGCGCCCAAC
GCCGCGAATC CAGCGGCGTA CCCGGACTAC TTCTGCTCCA ACGACGCCGT GCTGAACCAG
GTCTGGTACG CCGGCGCCTA CACCACGCAG CTGGACACCA TCGACCCGAC CGAGGGACGG
GTGTGGCCGC CGCCGTCCTC GGGCTGGGAG AACAACGGCG TGGTCGGCAC CGGCACCGAA
GTGCTCACCG ACGGCGCGAA GCGGGACCGC TCGGTGTGGC CCGGCGACAT GGGCGTCTCG
ACGACCACCG CGTATGTGAG CACCGATGAC ATGCTCGGCG TCCGCAACTC CTTGACCACC
ATGTACCAGA ACCAGAAGAC GACCGGCGAG CTGCCCTACG GCGGTCCCGA GTTCAGCTTC
TACGGCTCGG ACACGTACCA CACCTGGACG CTGGTCGGGA CATACATGTA CTACCTCTAC
ACCTCCGACA AAGCCTGGCT GGACAGCATA TGGAGCAAGT ACCAGCTCGG CATGACCTTC
ATCACCGCCA AGATCGACAG CAGCAACCTG CTGAACGTCA CCAACACCAA CGACTGGGCC
CGAGGCGACC AGACCGGGGA GAACATCGAA GCCAATGCCC TGCTTTACCA GGCGCTGACC
ACCGGCGCGA AACTCGCCAC GGCCGAAGGC AACAGCTCGC TGGCTGCGAC CTACGCGAGC
AAGGCCGCGA GCCTGAAGAC TGCCGTCAAC GCCAAGCTGT GGGACGTGTC GGTCGGCGCC
TACAAGGACA ACCCGGGCAG CACTCTGTAT CCGCAGGACG GGAACTCCTT GGCCGTCTGG
TACGGGCTGA CCAGTGCTTC GCAGGCCACT GCGATCATGG CGCACCTGCG CGGGAACTGG
AACAGCCTGG GAGCACAGGC TCCTGAGTTC AACAACAACC TCTCGCCGTT CGCCGGCTCG
ATGGAGCTCT ACGCGCACTT CACGGCCGGC GACGACGTCA ACGCGCTCAA CCTGATCCGC
GACGAGTGGG GCTACATGCT CGCCTCGCCG ATCGGCACCG CCAGCACCTT CTGGGAGGGC
TACTCCAACA ACGGCACACT GACCGCGTAT TCGAGCCCGT TCACCAGTCT CGCGCACGGC
TGGTCCACCG GCCCGACCGG CGCGCTGACC ACCGACGTGC TCGGGATCTC CCCCACCGCG
CCGTCCGGCG GCACGTACCA GGTCGTGCCG CACCCCGGCG ACCTGACGCA CGTCGAGGGC
ACGCTGACGG TGGCCTCCGG CAAGCAGATC CACGCCGTTT ACAACCACGG CTCCGCCGGC
GACTTCAGCC TGCAGGTGGA CTCCTCGACC AACGCCGGCT CCACCGGCGT GATCGCCGTG
CCGACGTGGG GACAGAGCCG CACGGTGACG GTGAACGGGC AGACCGCATG GAATGGGAGC
ACGTTCCTAG GCGCGTCGGG GATCACGAGC GCGGACACCG ACGGTCAGTA TGTGTACTTC
CGCGGAGTCT CGCCCGGCGT GTACACCGTC GCCTACAGCG CCTCGGCGAC CGCGCCACCG
ATCGCTTACC GCGCACTGCC CGGGGCATGG ACCCGGTGCG CCGCCGAGAA CGGCAACTGC
GCGGTGAGCG GCGCCTCGGT GATCGCCTAC GGCACCGGCG GACGCTTCAA CTATCTGCAG
ACCAGCACCG CCAAGACCTG CAGCAACGCC AGCTTCGGCG ATCCGGCTCC CAACGTCGCC
AAGTGGTGTT ACGTACGGAC CACGCAGCCG GCTTCGCCCG GCTGGAAGCA ATGCGCCACC
GAGAACCAGA ACTGCGCCTT CAGCGACCTG ATGACGGTCG CCTACGGCGC GAACGGCGCC
TACAAGTTCG CCACGCTCGG CAGCGGCGGC ACCGCCTGCG ACGACGCGGT GTTCGGCGAT
CCGGCACCGA ACGCCACCAA GGCCTGCTTC CTGCTCGACC CGCCGCCGAC GTTCGCGACG
TGGACCTCCT GCGCCGGCGA GAACGGGAAC TGCACGTTCT CCGGGACCCA CGAGGTGGCC
TTCGGGGCGA ACGGCCAGTA CTTCTTCGGC AGCTTCAGCG GCGGGACGCC GTGCACCGTC
GCAGTGTTCG GCGACCCGGT GTTCGGCACG GCGAAGGCGT GCTACGTGGA GTAG
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| Protein sequence | MKHVPIALLA FGVAIGGLST AVGDPAPAHA TAAPHARASL PAAKPTATVN PCAADNLSPT
SRTVSPVSVY ATSGTVGNAS AVLSGQNTRL TGNGSAVTLD FGKEVGGIVT LRFADASDSS
QSVGLAFSES NQFVGNASDA SSGGGSADGA ITTALPSGGG SYTMPKDKLR GGFRYLTLFL
NSGGYADLDG VSLAFSAAPN AANPAAYPDY FCSNDAVLNQ VWYAGAYTTQ LDTIDPTEGR
VWPPPSSGWE NNGVVGTGTE VLTDGAKRDR SVWPGDMGVS TTTAYVSTDD MLGVRNSLTT
MYQNQKTTGE LPYGGPEFSF YGSDTYHTWT LVGTYMYYLY TSDKAWLDSI WSKYQLGMTF
ITAKIDSSNL LNVTNTNDWA RGDQTGENIE ANALLYQALT TGAKLATAEG NSSLAATYAS
KAASLKTAVN AKLWDVSVGA YKDNPGSTLY PQDGNSLAVW YGLTSASQAT AIMAHLRGNW
NSLGAQAPEF NNNLSPFAGS MELYAHFTAG DDVNALNLIR DEWGYMLASP IGTASTFWEG
YSNNGTLTAY SSPFTSLAHG WSTGPTGALT TDVLGISPTA PSGGTYQVVP HPGDLTHVEG
TLTVASGKQI HAVYNHGSAG DFSLQVDSST NAGSTGVIAV PTWGQSRTVT VNGQTAWNGS
TFLGASGITS ADTDGQYVYF RGVSPGVYTV AYSASATAPP IAYRALPGAW TRCAAENGNC
AVSGASVIAY GTGGRFNYLQ TSTAKTCSNA SFGDPAPNVA KWCYVRTTQP ASPGWKQCAT
ENQNCAFSDL MTVAYGANGA YKFATLGSGG TACDDAVFGD PAPNATKACF LLDPPPTFAT
WTSCAGENGN CTFSGTHEVA FGANGQYFFG SFSGGTPCTV AVFGDPVFGT AKACYVE
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