| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5271 |
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| Symbol | |
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| ID | 8336625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6070022 |
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| End bp | 6071215 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958369 |
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| Product | PTS system, mannitol-specific IIC subunit |
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| Protein accession | YP_003115971 |
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| Protein GI | 256394407 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
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| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.161219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGA TGGCTTATAC GCCGGCTCCC ACCGGCACCG GATTGAAGGC CACAGTCCAG
AAGTTCGGCT CGTTCCTGGC CTCGATGGTG ATGCCGAACA TCGGCGCCTT CATCGCCTGG
GGTCTGATCA CGGCGCTGTT CATCCCGACC GGCTGGATCC CCAACAGCTC GCTGGGCGAG
CTGGTCTCGC CGATGATCAC CTACCTGCTG CCGATCCTCA TCGGCTACAC CGGCGGCCGG
CTCGTGCACG GCCAGCGCGG CGCGGTCATC GGCGCCATCG CGACCACCGG CGTGGTCGTC
GGCTCCTCGG TCCCGATGTT CCTGGGCGCG ATGATCGCCG GTCCCGCCTC GGCGTGGGTG
CTCAAGCAGT TCGACAAGCT CACCGCCGAC CGGCTGCGCG CCGGGTTCGA GATGCTGGTC
GACAACTTCT CCCTGGGCAT CATCGGCGGC GGGTTCGCAG TGCTGGGCAA GTGGGCGATC
GGGCCGGCGG TGAACCACGT CACCGACTGG GCCGGCACCG GCGTGAACTG GGTGCTGAAC
CACCACCTGC TGCCCTTCGT CAGCATCCTG ATCGAGCCGG CGAAGGTGCT GTTCCTGAAC
AACGCCATCA ACCACGGCGT CCTGGACCCG CTGGCGGTCG CGCAGTCCGC CGCGCACCAC
AAGTCGATCC TGTTCATGCT GGAGTCCAAC CCCGGTCCGG GTCTGGGAAT CCTGTGCGCT
TACCTGCTGT TCGGCCCGCG CGCGCTGCGG CCGACGGTCC CGGGCGCCAT CGTCATCGAG
TTCCTCGGCG GCATCCACGA GATCTACTTC CCCTACATCC TGATGAAGCC GCGGCTGATC
CTGGCCGCGA TCGCCGGCGG GTTCGCGGGT ATCTCAGTGT TCTCTATCAC CGGCGCCGGA
CTGGTCGCCT CGCCCTCGCC GGGCTCGATC TTCGCCTACC TCACCGAGAC GCCTCGGGGG
AGCTACTTCG GGGTGCTGGC CGGGGTCGTG GTCGCCGCGG CGGTGTCGTT CGCGACCGCG
TCGCTGCTGC TCGGGTTCGG GCGCGGGGAG AAGGCGGAGG AGATCGACGG CGAGGACGGC
GCGACCGATT CCGTGGACGC CGCACCTGAT GCCGTACCTG ACACCGCACC TGCCATCACG
ACCGACACCG CGACCGTTCC CGTGCAGTCC TCACCCGAAG GAGCGCCGGC ATGA
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| Protein sequence | MSSMAYTPAP TGTGLKATVQ KFGSFLASMV MPNIGAFIAW GLITALFIPT GWIPNSSLGE
LVSPMITYLL PILIGYTGGR LVHGQRGAVI GAIATTGVVV GSSVPMFLGA MIAGPASAWV
LKQFDKLTAD RLRAGFEMLV DNFSLGIIGG GFAVLGKWAI GPAVNHVTDW AGTGVNWVLN
HHLLPFVSIL IEPAKVLFLN NAINHGVLDP LAVAQSAAHH KSILFMLESN PGPGLGILCA
YLLFGPRALR PTVPGAIVIE FLGGIHEIYF PYILMKPRLI LAAIAGGFAG ISVFSITGAG
LVASPSPGSI FAYLTETPRG SYFGVLAGVV VAAAVSFATA SLLLGFGRGE KAEEIDGEDG
ATDSVDAAPD AVPDTAPAIT TDTATVPVQS SPEGAPA
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