Gene Caci_5270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5270 
Symbol 
ID8336624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6069717 
End bp6070025 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID644958368 
Productphosphotransferase system lactose/cellobiose- specific IIB subunit 
Protein accessionYP_003115970 
Protein GI256394406 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TCCCCGTCTC GGACATCAAG AAGATCATCG TGGCCTGCGA CGCCGGCATG 
GGGTCCTCGG TGATGCTCGC CGGGACCTTG AAGCGGCAGC TGAAGAACAC CGGCGTGATC
GTCGAGCACG CGCAGGTCTC GGCGATCCCT GCTGACGCCG ACCTCATCTT GACGCAGCAG
AGCCTGGCCG AACGCGCCCG CGCCGGCGCG CCGGGCAAGC CGGTGGTGAC CTTCCAGATC
TTCCTCGGCG ATCCGGCCGT GAACAAGGTG GTCAAGGCCG TGAAGGAAGG CGGCAGCATC
GATGTCTGA
 
Protein sequence
MTSIPVSDIK KIIVACDAGM GSSVMLAGTL KRQLKNTGVI VEHAQVSAIP ADADLILTQQ 
SLAERARAGA PGKPVVTFQI FLGDPAVNKV VKAVKEGGSI DV