| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5261 |
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| Symbol | |
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| ID | 8336615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6058015 |
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| End bp | 6060168 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958359 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003115961 |
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| Protein GI | 256394397 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC AGAACCACTT CGGCTGGGAC CGGGACGCCG ACGGCGTGGT CACCTTGACC
ATGGACGCGC CGGGCCAGTC CGCCAACACC ATGAACCGCG CCTTCGTCGA AGCCCTCGGT
CCGGTCCTGG ACCGGCTGGA GGCGGAGAAG GACGACATCG CCGGCGTCGT GGTCACCAGC
GCCAAGAAGA CCTTCTTCGC CGGCGGTGAT CTCAATGAGC TGATTCAGGC CCGGCCCGAG
GACGCCGCCG ACATCATGGC CCGCAACATG CTCATCAAGG CGCAGCTGCG CCGCCTGGAG
ACCCTCGGCA AGCCGGTCGC CGCCGCGATC AACGGCGCGG CGCTCGGCGG CGGGCTGGAG
ATCGCGCTGT CCTGCCACCA CCGCGTGGCG CTGGACGCCA AGGGTTCGGA GATCGGCTTC
CCCGAGGTCA CGCTCGGCCT GCTGCCCGGC GCCGGCGGCG TCGTGCGCTC GGTGCGGCTG
CTGGGCATCA CCGACGCGCT TCTCAAGGTC CTGCTTCAGG GGCAGCGCTA CAAGCCGCAG
GCGGCGCTGG AGAACGGCCT GGTGCACGAG GTCGTGGCCA CCCCCGAGGA GATGCTGGCC
GCCGCCAAGG CGTGGGTGCT GACCAACCCG GAGGCCAAGC AGCCCTGGGA CGCCCCCGGT
TACCGGATTC CCGGCGGCGA CCCGAAGAAC CCGAAGTTCG CCGCGAACCT GCCGGCGTTC
CCGGCGAACC TGCGCAAGCA GCTCAAGGGC GCGAACTACC CGGCGCCGCG CAACATCTTG
GCCGCCGCCG TCGAGGGCGC GCGCGTGGAC TTCGACAATG CCCTGATCAT CGAGGCGCGG
TACTTCGTCG AGCTGGTCAC CGGGCAGGTG GCGAAGAACA TGACGCAGGC CTTCTTCTTC
GACATGCAGA AGGTGACCAA CGGCGCCTCG CGCCCGGCCG GCTACGAGCC GTGGAAGGCC
ACGAAGGTCG CGGTGCTCGG CGCGGGCATG ATGGGCGCCG GGATCGCCTA CGTCTGCGCG
CGCGGCGGCA TCGAGGTCGT GCTGAAGGAC GTCAGCGTCG AGGCTGCCGA GAAGGGCAAG
GCGTACTCCG CCGGCATCCT GGACAAGGCG GTCTCGCGCG GGAAGATGAC CCGCGAGGCC
ACCGATGCGG TCCTGGCCCG GATCCGCCCG ACCGCCGACG CCGCCGACGC CGCAGGCGCC
GACCTGGTCA TCGAGGCCGT CTTCGAGTCC CCGGAGCTGA AGGCGAAGGT GTTCGGCGAG
ATCCAGGACG TCGTCGCCCC CGACGCGCTG CTGGGCTCGA ACACCTCCAC GCTGCCGATC
ACCGACCTGG CGCACGCGGT CACGCGCCCG GCGGACTTCA TCGGGCTGCA CTTCTTCTCC
CCGGTGGACA AGATGCCGCT GCTGGAGATC ATCGTCGGCG AGCAGACCTC GGACGCGGCC
ATCGCCAAGG CCTTCGACCT GGCCCGGCAG ATCAAGAAGA CCCCGATCAT CGTCAACGAC
AGCCGCGGCT TCTTCACCTC CCGCGTCATC GGCCGCTTCC TGGACGAGGC GGTGGCGATG
GTGAACGAGG GCCTGAGCCC GGCCTCCATC GAGCAGGCCG GCTCCCAGGC CGGCTACCCG
GCGCCGCCGC TGCAGCTGAT GGACGAGCTG ACGCTGACCC TCCCGCAGAA GATCCGCAAG
GAGGCGCGCG CCGCCGCCGG CGCGGACTGG ACCGAGCACG GCTCCGAGGC CGTCATCAAC
CGCATGGTCG ACGAGTTCGG CCGCGGCGGC CGCTCGGCCG GCGCGGGCTT CTATGAGTAC
CAGGACGGCA AGCGCACCGG CCTGTGGCCC GGTCTGCGCG CGGCGTTCCC GCCGCACGTG
GGCATCCCGT TCCAGGACAT GCAGGAGCGC ATGCTGTTCG CCGAGGCGCT GGACAGCGTC
CGCTGCCTGG ACGAGGGCGT GCTGCGCTCG GTCGCCGAGG CGAACGTCGG CTCCATCCTC
GGCATCGGCT TCCCGGCCTG GAGCGGCGGC GTGATCCAGT ACATCAACGG CTACGACGGG
GGCGTCACCG GCTTCGTGGC GCGCGCCAAG GAGCTGTACG AGAAGTACGG CGAGCGGTTC
GCCGTGCCGC AGTCGCTGAT CGAGAAGGCC GAGCGCGGGG AGCGGATCGA GTAG
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| Protein sequence | MSEQNHFGWD RDADGVVTLT MDAPGQSANT MNRAFVEALG PVLDRLEAEK DDIAGVVVTS
AKKTFFAGGD LNELIQARPE DAADIMARNM LIKAQLRRLE TLGKPVAAAI NGAALGGGLE
IALSCHHRVA LDAKGSEIGF PEVTLGLLPG AGGVVRSVRL LGITDALLKV LLQGQRYKPQ
AALENGLVHE VVATPEEMLA AAKAWVLTNP EAKQPWDAPG YRIPGGDPKN PKFAANLPAF
PANLRKQLKG ANYPAPRNIL AAAVEGARVD FDNALIIEAR YFVELVTGQV AKNMTQAFFF
DMQKVTNGAS RPAGYEPWKA TKVAVLGAGM MGAGIAYVCA RGGIEVVLKD VSVEAAEKGK
AYSAGILDKA VSRGKMTREA TDAVLARIRP TADAADAAGA DLVIEAVFES PELKAKVFGE
IQDVVAPDAL LGSNTSTLPI TDLAHAVTRP ADFIGLHFFS PVDKMPLLEI IVGEQTSDAA
IAKAFDLARQ IKKTPIIVND SRGFFTSRVI GRFLDEAVAM VNEGLSPASI EQAGSQAGYP
APPLQLMDEL TLTLPQKIRK EARAAAGADW TEHGSEAVIN RMVDEFGRGG RSAGAGFYEY
QDGKRTGLWP GLRAAFPPHV GIPFQDMQER MLFAEALDSV RCLDEGVLRS VAEANVGSIL
GIGFPAWSGG VIQYINGYDG GVTGFVARAK ELYEKYGERF AVPQSLIEKA ERGERIE
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