| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5260 |
|---|
| Symbol | |
|---|
| ID | 8336614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6056790 |
|---|
| End bp | 6057929 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958358 |
|---|
| Product | Epoxide hydrolase domain protein |
|---|
| Protein accession | YP_003115960 |
|---|
| Protein GI | 256394396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.100827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG ATCCCTTCAC CGTCTCGATC CCGGACGCTG TCCTGACCGA CCTGCGCGAG
CGGATCGCGC GGACCCGCTG GCCGGACGCG GCGCCCGGCG AGGCATGGAG CCAGGGCGTC
GAGGTCGGCT ATCTGCGGGA GCTGCTGGAA TATTGGGCCG ACGGGTTCGA CTGGCGGGCC
GCGGAGCGTT CGCTGAACCG GTATCGGCAC TTCACGGCTG AGGTGGATGG GGTGCGCGTC
CACTTCGTGC ACCACAGAAG CGACAGCGGC GGCGACCGCG TCCCGCTGAT CCTGACCCAC
GGCTGGCCGA GCACCTTCGC CGAGATGCTC GGTCTGGTGG ACCGGCTCGG CGACCGGTTC
GACCTGGTGG TGCCGTCACT GCCGGGATAC GTGTTCTCAC AACGCCCGGC GCGGGTCGGC
GTGGACCGGC GACACGTCGC GGGTATGTGG CACCGGCTCA TGCAAGGGCT CGGATACGAG
CGCTACGGCG CATGCGGCGG AGACTTCGGC GCCGGCATCG CGACGCACAT GGCGCTGATG
GAACCTGAGC GCATGATCGG AATCCACCTG AGCACACCGG AATTGGCGCC CTACGACGGA
CCGGGCGCGG CGCCGCTGAC GCCCGAGGAG CAGGCGTACC TGGCGCAGGT GGAACGTTGG
GAGCAGACCG AGCGCGGTTA CAGCGCAGTG CAATCAACGC GCCCGCAGAC GCTGGGCTAC
GGCCTGAACG ACTCCCCCGC AGGCCTTGCG GCCTGGGTTC TGGACAAGTG GCGCTCCTGG
TCCGACAGCG GCGGCGACCT GAACGCCACG TTCGGGCGTG ACAGCCTGCT GACAATGCTG
ACCCTGTGGT GGGCGACGGA CTCGATCACC TCCTCCATGC GCGACTACTA CGACAACCGC
TGGCACGGCA CGCCGATCGG ACCGCAGGAC CGGGTGCGGG TACCGACGGC GATGGCCGTG
TTCGCGAACG AGTTCGTGTC CGAGGGACAG GTCCCCCGCG CGTGGTACGA GCGGCTCTAC
CAAGTGGAGC GCTGGACGGT GTTCGAGCGC GGAGGACATT TCGCGGCGAT GGAAGAGCCG
GAGTTGCTGG CCGGGGACAT CGCCGAGTTC TTCAGGCTCC TGAGGCAGCC CATCAGCTGA
|
|---|
| Protein sequence | MRIDPFTVSI PDAVLTDLRE RIARTRWPDA APGEAWSQGV EVGYLRELLE YWADGFDWRA
AERSLNRYRH FTAEVDGVRV HFVHHRSDSG GDRVPLILTH GWPSTFAEML GLVDRLGDRF
DLVVPSLPGY VFSQRPARVG VDRRHVAGMW HRLMQGLGYE RYGACGGDFG AGIATHMALM
EPERMIGIHL STPELAPYDG PGAAPLTPEE QAYLAQVERW EQTERGYSAV QSTRPQTLGY
GLNDSPAGLA AWVLDKWRSW SDSGGDLNAT FGRDSLLTML TLWWATDSIT SSMRDYYDNR
WHGTPIGPQD RVRVPTAMAV FANEFVSEGQ VPRAWYERLY QVERWTVFER GGHFAAMEEP
ELLAGDIAEF FRLLRQPIS
|
|---|
| |