| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5258 |
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| Symbol | |
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| ID | 8336612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6054139 |
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| End bp | 6056100 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958356 |
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| Product | glycoside hydrolase family 9 |
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| Protein accession | YP_003115958 |
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| Protein GI | 256394394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.35373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCCA GGGCACGACC GCGTTTCCGC CACCGCAGGA CGGTCGCCGC GCTCAGCGCC
GTCAGCCTGG CCGGCCTGAC GGTCGGCACC GCCACCGTGC TCTCGCAGCC CGCGCAGGCC
GCGCAGTCCG CGAACACCGG GCTGGTCCGC GTCGACCAGG CCGGGTACCT GGCCGGGGAC
GTGAAGCAGG CGTACCTGAT GACCGGCGGG GCGGTGTCTG GGGCGAAGTT CTCGGTGCTG
AACGCCAAGG GCAAGACGGT ACTCACCGGC AAGGTCGGCG GCACCAGCCT CGGCAAGTGG
AACGCCGCCT ATCCGGACGT CTACCCGATC GTCTTCAGCG GCTTGAAGAC GCCGGGGACC
TACCACATCG CGGTCGCCGG GAGCGCCTCG GGCAGCTCGC CGACGTTCAC CGTCACCAGC
TCCGGCTCGC TCTACGGCAA GCTGGTCACC GACGGCGTCA CCTTCTTCCA GACCCAGCGC
GACGGCTCGA ACGTCGTCCC CGGCGCCCTG AACCGCAAGC CCTCGCACCT GAACGACGCC
GCGGCGAGCC TCTACGCCTG GCCGACCTTC GCCCCCGACG ACTCGGACAC CATCACCGAC
GCCGACCTGA CCAAACTCGG CGGTACCGTC GACGTCTCCG GCGGCTGGTT CGACGCCGGC
GACTACTTGA AGTTCTCCAA CAACGAGGCC TTCGGCGACA TCACGCTGCT GGCCGCGCAG
CGCGCCCTGG GCTCCTCCGC CCCGGCCTCG CTGACCGCCG AGGCGCACTA CGGCGAGACC
TGGCTGAACA AGGCCTGGAA CCAGAAGACG AAGACGCTGG TCTTGCAGGT CGGCATCGGC
TCGGGCAATG CCGCCGGTAC TTTCACCGGC GATCACGACC TGTGGCGCCT GCCGCAGAAG
GACGACGGCG ACACCGCCAC CGCCGACCGC TACTCCGCCG CGCACCGCCC GGCGTTCCTC
GCCGCCAGTC CGGGGGCGAG GATTAGCCCG AACATCGCCG GGCGCGTGGC GGCGGCGTTC
GCCCTGGCCG CGCAGGTCGA CGCGAAGAGC AACCCCAAGC AGGCCGCCGC CGAGTACCAG
GCTGCCGCCT CGGTGTATGC GCAGGCTGAT ACCAGCGCTC CGCCGAGCCC GCTGACCACC
GCGCTGCCGA ACGGCTACTA CCCCGAGTCG ATCTGGCACG ACGCGATGGA GTTGGGCGGC
GCCGAACTGG CACTGGCCGC GCAGAAGCTG GGACACAGCC CTTCTTCGTA CCTGTCGCAG
GCCGCTACTT ACGCCAAGGA CTACATCGCC TCCGACACCG GCGACACGTT CAACCTCTAC
GACAACAGTG CCCTGGCACA CGCCGACCTG ATCAAGGCGA TCGCCGCCGC CGGCAACCCG
TCGGGGCTGG CGGTCACTCG TGCCGCACTG ACCGCGGACC TGAAGCGGCA GGTGCAGTCG
GCGGCGAGCA AGGCCTCCTC CGACGTCTTC CACGCCGGCG GCGACTACGC GGACTTCGAC
GTCAACGCGC ACACCTTCGG CTTCCTGACC GAGGAGGCGC TGTACCGGCA GGCCAGCGGC
GACACCTCGT TCCAGTCCTT CGCCACCGAA CAGCGCGACT GGCTGCTGGG CGCCAACGCC
TGGGGACAGG CGTTCATGGT GGGAGAGGGC AGCACCTTCC CGAAGTGCAT GCAGCACCAG
GTCGCGAACC TGTCCGGCAG CCTGAACGGC ACCGGCGCGA TCGCCACCGG CGCGGTGATG
AACGGCCCGA ACAACACCAG CAACTTCGAC GGCGGCCTCG GCTCCTACCA GGACGGCATG
AAGCCCTGCC CGCCCGGCGG CACTGACCCC GACACCAAGT TCACCGGCCA CAACAGCCGC
TTCTCCGACG ACGTCCGCTC CTGGCAGACC GACGAGCCGG CCCTGGACAT GACCGGCTCG
GCAGTCCTCG GCGCCGCGAT GCAGGAGACC CTCGGCGGCT GA
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| Protein sequence | MVSRARPRFR HRRTVAALSA VSLAGLTVGT ATVLSQPAQA AQSANTGLVR VDQAGYLAGD
VKQAYLMTGG AVSGAKFSVL NAKGKTVLTG KVGGTSLGKW NAAYPDVYPI VFSGLKTPGT
YHIAVAGSAS GSSPTFTVTS SGSLYGKLVT DGVTFFQTQR DGSNVVPGAL NRKPSHLNDA
AASLYAWPTF APDDSDTITD ADLTKLGGTV DVSGGWFDAG DYLKFSNNEA FGDITLLAAQ
RALGSSAPAS LTAEAHYGET WLNKAWNQKT KTLVLQVGIG SGNAAGTFTG DHDLWRLPQK
DDGDTATADR YSAAHRPAFL AASPGARISP NIAGRVAAAF ALAAQVDAKS NPKQAAAEYQ
AAASVYAQAD TSAPPSPLTT ALPNGYYPES IWHDAMELGG AELALAAQKL GHSPSSYLSQ
AATYAKDYIA SDTGDTFNLY DNSALAHADL IKAIAAAGNP SGLAVTRAAL TADLKRQVQS
AASKASSDVF HAGGDYADFD VNAHTFGFLT EEALYRQASG DTSFQSFATE QRDWLLGANA
WGQAFMVGEG STFPKCMQHQ VANLSGSLNG TGAIATGAVM NGPNNTSNFD GGLGSYQDGM
KPCPPGGTDP DTKFTGHNSR FSDDVRSWQT DEPALDMTGS AVLGAAMQET LGG
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