Gene Caci_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5242 
Symbol 
ID8336596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6037727 
End bp6038419 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content76% 
IMG OID644958340 
Producthypothetical protein 
Protein accessionYP_003115942 
Protein GI256394378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.169695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCG CGCTGCGGAC GCTGGTGCCC GGGGGTGCGT TGCGGCGTGG CGGGGTGCTG 
GCGGTGGGGG ATCGGGTGCG GCCGTGTGGG GATGCGCCGA GCTATCTGGC GTTGGCGTTG
GCGGCGGGGG CGTCGGCGGG TGGGGCTTGG TGCGGGGTGG TGGGGTTGCC GGCGTTCGGG
ATCGCGGCGG CTTCGGGGAT GGGCGCGGAC CTGGGGCGGT TCCTGATGCT GGACGAGCCT
GGTGAGCGCT GGGCTGAGGC GGTGGGGGTG CTGGCCGGTG CGGTGGACCT GGTGCTGGTG
CGGCCGCCGC GTCGGCCCGG TGGTGAGCAG GTGCGCCGGA TCGGCGCCCG GCTGCGGCGT
ACGGCCCGTC AGCGGGGCGC GGTGCTGGTG GTGGCCGGGG ACTGGCCGGG CGCTGACCTG
CGGCTGCGGC TGACGGAGAC GGCCTGGTCC GGTCTCGGTG ACGGTACCGG GCACCTGGCC
GGCCGCCGGG TCACGATCGC CGCCGACGGT CGGGGTGCCG CCGGACGTGA GCGCACCGCC
CTGCTGTGGC TTCCAGCCGC CGACGGAGCG GTCCGCGAGT GGGTCGCGGA GACGGACGCG
CCGATGCTGC CGGCAGACGG CGGCGATCAG CGGTTCGGGG TGTCGGCACA GATCCGGGAC
GGCGGTGAGG TCGTGCAGTT GTGGAGCGCA TAG
 
Protein sequence
MLAALRTLVP GGALRRGGVL AVGDRVRPCG DAPSYLALAL AAGASAGGAW CGVVGLPAFG 
IAAASGMGAD LGRFLMLDEP GERWAEAVGV LAGAVDLVLV RPPRRPGGEQ VRRIGARLRR
TARQRGAVLV VAGDWPGADL RLRLTETAWS GLGDGTGHLA GRRVTIAADG RGAAGRERTA
LLWLPAADGA VREWVAETDA PMLPADGGDQ RFGVSAQIRD GGEVVQLWSA