Gene Caci_5235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5235 
Symbol 
ID8336589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6026086 
End bp6026424 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content70% 
IMG OID644958333 
ProductNIPSNAP family containing protein 
Protein accessionYP_003115935 
Protein GI256394371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG AGATCCGCAC CTACCGCCTG CACCCCGGCA CGCGCGAGGA GTTCCTGCGC 
GCGATGACCG AGGAGGCGAT CCCGCTGCTG GCGAAGGCGG GGATCGACGT GGTGGCGGCC
GGGCCGTCGC TGTACGCCGA GGACGGTGAT GAGGAGGCGT TCCTGATGCG GGCCTTCGAC
TCGCTGGAGC AGTTGCAGGA GCAGGAGGAC GCCTTCTACT CCAGCGCGGC GTGGCTGGAA
GGGCCGCGGG AGGCGATCGT GACGCCGATC GTGCAGTACC ACTCGATCGC GGTGGAGACG
GCCGCGGCGG TGGTCGACGG GCTGCGGCGC CCCTGGTAG
 
Protein sequence
MILEIRTYRL HPGTREEFLR AMTEEAIPLL AKAGIDVVAA GPSLYAEDGD EEAFLMRAFD 
SLEQLQEQED AFYSSAAWLE GPREAIVTPI VQYHSIAVET AAAVVDGLRR PW