| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5225 |
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| Symbol | |
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| ID | 8336579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6014274 |
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| End bp | 6016118 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958323 |
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| Product | glycoside hydrolase family 76 |
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| Protein accession | YP_003115925 |
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| Protein GI | 256394361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4833] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0174562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAGAA TCCTGATCCT CCTCACAGCT CTGGTCACGG CGCTGGTACC GCTGCTCGCC
ATGGCGCCGC CGCGTGCGAA CGCGGCGAGC GCCGTGTGCG CGCTGTACTG CGACACGCGT
GATCCCTCGC TGGCGCAGCA GGAGACGTTC CCGACCCCGA ACGTCTCCGA GAACGGCCGC
GTGATCGCAT TGCACGTGGA CGACGTCGAC GGCATGGCCT GGGCCAGCAT CGACAACGGC
CGGCTGAACG ACTCGGTCTG GATCGACCGG TCGTGGGACG CCGGCAGCAG CTGGGACGGC
TTGTTGGGCA AGGCGTGGAT CCCGAGCTCG TGGACCGGTA CACGGACCCT GATGTACAAC
ATGTACGACC CCTCCGACCA CCGCCGCGCG GTGGTGCGTG CCTGCGGCGA CGCCAGCGGG
GTGGTGTGTA CGAACTGGGT CCACCTGCCG GTGTGCGCGG CGCGGTGTGA CGGCGCCGAT
TCCAGGACCT CGGTCGGGAA CACCTCACCG GTCCCCGACG CCACGCTGTC CGGGCGCGAC
ATCGCGCTGC ACGTCGACTC CGGCGGCATG GCCTGGGCTT CGATCGCCGG CGGAGCGCCC
GGCGACGAGG TGTGGCTGGA CCGGTCGTGG GACGGCGGCG CGACGTGGCC GGACGGCTCG
AGCAAGGGCC GGGTGAGCGT GCCGTCGGGG GCGTCCGGTA CTCAGACTAT TGAGATCAAC
ATCGACGATC CGTTGGGCCG GCTGGCCGGG GGCGCCGTGC GCGCCTGCGG GCGTGCGGTG
ACCGGGCAGA ACGGCAGCTG CACGGCGTGG GCGCGCGCCG CCGCGGTCCC GGCGAAGGCT
GCCGCCGACG CGCTGATGTG GTCTTATGAC CCCTCCAACG CATGGTGGCC GTCGAGCTGG
TGGAATTCGG CGGTCGCACT GACGTCGGTG ATCGACTACA CGCGCGGCTC GGGCGATACG
GCATACGAGT GGATCGTCGA CCGCACGTTC CAGGTGAACA AGGTCGCCTT CCCGGCCGGC
GCGCGCAGCT CGGACCCCAT CCAGGGCGAC TTCATCAGCC AGGCGACCGA CGACACCGAG
TGGTGGGCGC TGGCGTGGAT CGACGCGTAC GACCTGACGG GGAATCGGAC GTACCTGAAC
GAGGCCGTCA CCATCACGAA CCATGTCAGT TCCCTGTGGA ACACCAGCAC CTGCGGCGGC
GGCGTGTGGT GGAACACGCA GAAGACGTAC AAGAACGCGG TGACCAATGC GCTGTATGTG
GATCTGACCG CCGCGCTGCA CAACCGCATC GCGGGCGACA CGGCGTGGCT GGCGCGGGCG
ACGACGTCCT GGAACTGGTT CCGCTCCAGC GGACTGATCA ACGGCTCGGG TCTGGTCAAC
GACGGCCTGA CGAACGCGTG CACGAACAAC GGCCAGACGG TCTGGACGTA CAACCAAGGG
CTGGCCATCG GCGCGGCGCA GGAGATGTAC CGCGCGACCG GCGACAGCGG CGACCTGAGC
GAGGCGCGCC ACCTCGCCGA CTCGGCGGTG CACTCCCCCA CACTGGTGAC GAACGGGCTG
CTCACGGAGT CGTGCGATGC GCTGACCGCC ACCTGCGACG ACAACCAGAA GCAGTTCAAG
GGGATCTTCA TGCGCTTCCT GGGCGAGCTG AACGCCGACG CGTCGGTCGG TGGCGCGTAC
AGCACGTTCA TCCAGGCGCA GACGTCGTCG CTGTGGAACG CGGACCGGAA CTCGCTCAAC
CAGCTCGGGG AGCGATGGTC GGGGCAGGGC TCGGGGACGA ATCCGAATGT GAGCGATTGG
CGGACGCAAG CGAGCGGGTT GGAGGCGCTG GACGCGGGGG TTTGA
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| Protein sequence | MRRILILLTA LVTALVPLLA MAPPRANAAS AVCALYCDTR DPSLAQQETF PTPNVSENGR
VIALHVDDVD GMAWASIDNG RLNDSVWIDR SWDAGSSWDG LLGKAWIPSS WTGTRTLMYN
MYDPSDHRRA VVRACGDASG VVCTNWVHLP VCAARCDGAD SRTSVGNTSP VPDATLSGRD
IALHVDSGGM AWASIAGGAP GDEVWLDRSW DGGATWPDGS SKGRVSVPSG ASGTQTIEIN
IDDPLGRLAG GAVRACGRAV TGQNGSCTAW ARAAAVPAKA AADALMWSYD PSNAWWPSSW
WNSAVALTSV IDYTRGSGDT AYEWIVDRTF QVNKVAFPAG ARSSDPIQGD FISQATDDTE
WWALAWIDAY DLTGNRTYLN EAVTITNHVS SLWNTSTCGG GVWWNTQKTY KNAVTNALYV
DLTAALHNRI AGDTAWLARA TTSWNWFRSS GLINGSGLVN DGLTNACTNN GQTVWTYNQG
LAIGAAQEMY RATGDSGDLS EARHLADSAV HSPTLVTNGL LTESCDALTA TCDDNQKQFK
GIFMRFLGEL NADASVGGAY STFIQAQTSS LWNADRNSLN QLGERWSGQG SGTNPNVSDW
RTQASGLEAL DAGV
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