Gene Caci_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5217 
Symbol 
ID8336571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5996067 
End bp5996459 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID644958315 
Producthypothetical protein 
Protein accessionYP_003115917 
Protein GI256394353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGT TCCGCGCAGC AGTAGAGGCT CGGGACACGG CCGCGATCGA GGCGATGCTC 
GCCGAGAACG TCGTGTTCAC CAGCCCTGTC GCCTTCAAGC CGTACCCCGG CAAGGCCATC
ACCGCGGCGA TTCTGCGCGG CGTACTGCGG GTGTTCGAGG ACTTCCGCTA CGTGCGCGAG
ATCGCCGGCG CCGACGGCCG CGACCACGCG CTGGTGTTCA CCGCCACGGT CAACGGCAAG
CAGGTCAACG GCTGCGACTT CCTGCACGTC GACGACGACG GGCTGATCGA CGACTTCATG
GTCATGGTCC GGCCGCTGTC GGGCGCGCAG GCGCTCGCCG AGGCGATGGG TGCGGAGTTC
GCGCGGATCA CGGAGGAAGT CGTCGGGAGC TGA
 
Protein sequence
MHPFRAAVEA RDTAAIEAML AENVVFTSPV AFKPYPGKAI TAAILRGVLR VFEDFRYVRE 
IAGADGRDHA LVFTATVNGK QVNGCDFLHV DDDGLIDDFM VMVRPLSGAQ ALAEAMGAEF
ARITEEVVGS