Gene Caci_5212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5212 
Symbol 
ID8336566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5989674 
End bp5990573 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID644958310 
Producthypothetical protein 
Protein accessionYP_003115912 
Protein GI256394348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0791068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG GGACGCTCGA TCGCGAGCAG GTGGCGGCCA GACTGCTGGA CGCGTCGGCC 
AAGCACTCCT TCGACCCGGT GCACGAGGTC GACTGGGATC AGCCGCAGCC GGCGGACCTG
TTCTACGCGG TGCCCGAGCA CCTGTCGCTG TACGGCACGC CGTTGTGGGA GCGGATGACG
CCGGAGCAGC GGATCGAGCT GAGCCGGCAG GAGATCTGCA ACATCATGTC GATGGGGATC
TGGTTCGAGA CCATCCTCAT GCGCATGCTG CTGAAGATGG CCTACGAGCG GCACCGGCCG
GAGTCGCGGC ACGTGCAGTA CGCGTACACC GAGGTCGGCG ACGAGTGCCG GCACTCGCTG
ATGTTCATCC GGATGATCGA GACCGTCGGC GCGCGCCCCT ACCGCCGCCC CGGCTATCTC
AACACCCTGG GCCGCTACGT CCCGGTGCTG CTGCAGGGTG CGCCGATGTG GGTGGGCACG
CTCATGGGCG AGGAGATCGT CGACGTGATG CAGCGGGAGA TGATCAAGGA CGAGCGGGTC
CAGCCGCTGG TGCGGCAGGT CTCGAAGATC CACGTCATCG AGGAGACCCG GCACGTCAGC
TACGCCCGCG AGGCGCTGGC CCGCCGCCTG CCCCGCGCCG GCCGCCTGGA GCGCGAGCAC
GCGCGGCTGG TCGCCGCCGA GAGCGCGGTG GTGGTCGGGG AGTTCATGGC GAACCCGGCC
GTGTACAAGC GGGTCGGGAT CGCCGATCCG GAGGCCGCAC GGCGCATGGC GAAGGGCAAT
CCGCACCACC TGGAGGTGAA GCGGCGGGCG GCGGCGAAGG TGGTGCCGTT CTTCGAGGAG
CTGGGGCTGA TGGGCGGTCC GACGCTGAAG CGCTGGCAGC GGTCGGGGTT CGTGGGCTGA
 
Protein sequence
MARGTLDREQ VAARLLDASA KHSFDPVHEV DWDQPQPADL FYAVPEHLSL YGTPLWERMT 
PEQRIELSRQ EICNIMSMGI WFETILMRML LKMAYERHRP ESRHVQYAYT EVGDECRHSL
MFIRMIETVG ARPYRRPGYL NTLGRYVPVL LQGAPMWVGT LMGEEIVDVM QREMIKDERV
QPLVRQVSKI HVIEETRHVS YAREALARRL PRAGRLEREH ARLVAAESAV VVGEFMANPA
VYKRVGIADP EAARRMAKGN PHHLEVKRRA AAKVVPFFEE LGLMGGPTLK RWQRSGFVG