| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5210 |
|---|
| Symbol | |
|---|
| ID | 8336564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5987310 |
|---|
| End bp | 5988524 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958308 |
|---|
| Product | protein-L-isoaspartate(D-aspartate)O- methyltransferase |
|---|
| Protein accession | YP_003115910 |
|---|
| Protein GI | 256394346 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.686839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAGG GTGCTGTCAG TACGGCGGAG GTTGCGGCGG CGGTGCGGGT TGTGCCGCGG
CATGTGTTCA CGCCGGGGTT GGCGTTGGAG CGTGCTTATG CGAATCAGGT TGTGTTCGTG
AAGCGGGATG AGTTCGGGGT GCCTACCAGT TCGGTGAGTG CGCCGGACAT ACAGGCGATC
ATGTTGGAGC AGGCGGAGAT TCGGCCGGGG ATGCGGCTGC TGGAGATCGG TTCTGGTGGC
TACAACGCTG CGCTCATGGC TGAGCTTGCC GGGCCTGATG GTGAGGTCAC GACCATCGAT
ATCGATCCGG TGGTGACTGA GCGTGCCCGC CGCTGCCTTG ATGAGGCCGG GTACGCCGAC
GTGCGTGTCG TGACTGCTGA TGCCGAGGGC GGCGTGCCCG AGGGTGCGCC GTACGACCGG
ATCGTCGTGA CCGTCGAGGC CTGGGATCTG CCGCCGGCCT GGATCAGGCA GCTGACGCCG
CACGGTCGCA TCGTCGTGCC CCTCCTCCTG CGCGGCATGA CCCGCTCCAT CGCCTTCGAC
CGCGTGGACG ACCACCTCGT CAGCCGCTCG GCACGTCTGT GCGGCTTCGT CAAGATGCAG
GGCGCTGGCA GCCGTCCCGA CCAAGGGCTC GCCCTCAACC ACGGCGACCT CACCATCGAC
ACCGACGACA GCGGCGCCAT CCCCACCGCA GCGCAGATCG AGGCGCATCT GCGCCACGCC
CCCCGCGCCG AGCGGTGGTC CGGCGTCCGA GTCTGGCGCT GGGAGCCCTG GGACACCCTG
CCGCTGTGGC TCGCGACCGA CTTCCCCGGC TACTGCCAGC TCTCCGTCAA CGTCCCCGGA
GCCCCCGCCG TCCCCGGACC GCCTGGCGCC CCAGGCACCG AACCCCTCGA ACCGGCCCTG
GCCATCGCCA CTCCCGCGAT CGCCACGCCC GACGGCTTCG CCCACCTCAC CGCCCGCGCC
TGCCCCGACG GACGCATCGA GCTCGGCGCG CACGCCTTCG GCCCGCAAGG TCCGCAGCTG
GCCGCCGCCG TCGCCGACAG CATCGCGGCA TGGAACCGCG ACCAGCGCGC GGGCTCCGGT
CCCGTGATCA CCGCCTGGCC GATCGACGCC CCGCTCCCGG ACGCCGCCGA CGTGCTCGCC
GTCAAGAAAC ACGTCCAACT CACCGTGACC TGGTCGAAAC CGGAAATCCC GCATCGGAGC
CAGCCAAACG GGTAG
|
|---|
| Protein sequence | MAEGAVSTAE VAAAVRVVPR HVFTPGLALE RAYANQVVFV KRDEFGVPTS SVSAPDIQAI
MLEQAEIRPG MRLLEIGSGG YNAALMAELA GPDGEVTTID IDPVVTERAR RCLDEAGYAD
VRVVTADAEG GVPEGAPYDR IVVTVEAWDL PPAWIRQLTP HGRIVVPLLL RGMTRSIAFD
RVDDHLVSRS ARLCGFVKMQ GAGSRPDQGL ALNHGDLTID TDDSGAIPTA AQIEAHLRHA
PRAERWSGVR VWRWEPWDTL PLWLATDFPG YCQLSVNVPG APAVPGPPGA PGTEPLEPAL
AIATPAIATP DGFAHLTARA CPDGRIELGA HAFGPQGPQL AAAVADSIAA WNRDQRAGSG
PVITAWPIDA PLPDAADVLA VKKHVQLTVT WSKPEIPHRS QPNG
|
|---|
| |