Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5206 |
Symbol | |
ID | 8336560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5981182 |
End bp | 5983563 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958304 |
Product | acyltransferase 3 |
Protein accession | YP_003115906 |
Protein GI | 256394342 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.236489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.879135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCCTG ATGAGAGGGC GCGGCCGCTT CCGCGTCATC GCTTCGTCGA GTTGCCGGTG TTCGGCACCG CCTCAGGGCG GCGCGGGAGC GGCGGCTCGG ACGCGGGTAC AGCGCGGACC GACGGAGCCG CCGAGCTGAG GTCGATCGCC GGCCTCGAAG CCTCGACGGA GGCTGACACG CCCCTGCGTG CCGGGCCCGA AGCGGGAGAG TCCTTAGCGC CGCAGCCCGC CACCGCCCGC ATCCCGGCCC TCGACGGCCT CCGCGCGGTC GCCGTCGCCG CCGTCCTGCT CTACCACGCG GGCCTGACCC GCTTCCGTGG CGGGTTCCTC GGCGTCGACG TCTTCTTCGT CCTGTCCGGC TACCTCATCA CCGGCCTGCT CGCCCGCGAA TACCTCGCGA CCGGCGCCGT CGCCCTGCGC CGCTTCTACC ACCGCCGCGC GCGCCGTCTG CTGCCGGCGC TGTTCGTCGT CCTGGCGGCG GTGTGCGCCT ACGTGGTGCT GTGGCTGCCG AGCGAAGCCG CGAGCTTCCG CAGCGACGCC ACCGCCTCGG TGTTCTACGT GACCAACTGG TGGTTCGTCG CCCACGGGCA GTCCTACTTC GGCGGCACCG GACGCCCGAG CCTGCTGCTG CACCTGTGGT CGCTGGCGGT CGAGGAGCAG TTCTACGTCG TCTGGCCCGC GTTCCTGCTG GTCGCGCTCG GCCGGTCGCC GCATTCGCGG GGGTCCGGGA ACGGCGAGCT AACCGAACGT ACCGCGCGCG CCGAACGCGC CGAACGCCTC AGAGCCCTGT GGCGCGCCGT CGGCTGGGCC ACGCTGCTCG CCGCCTGCTC GGTCGGCCTG ACCGTCCTGC TCTACTCGCC GTGGCGCGAC CCCTCCCGCG TCTACTACGG CACCGACACC CGTGCCCTCG AGCTGCTGAT CGGCGTCCTG GCAGCGCTCC TGCAGATCGC CCGCGAGAAG CCGCGCGAGC AGGCGGAAGC GGAAACGCAA AGTCGGCCGC AGCCGCAGCC GACAGCGAAC AACGCACGCC GCATCGCCAC CGAATCCGCG TCCTTCCTCA CCCTGGCCGG CATCCTGTGG GCCTTCGCCG CCGTCCCGGC GACCTCGTCC GCGCTCTACC CGGTCGGCCT GATCGCGGTG TCCGTCGCCT CGGCGGTGCT CATCAGGACC CTGGTCGCCG GGACCGCGGT GTCCGGGCTG CTGTCCGGCC GGCTGTTCGT CTGGCTCGGC GAACGCTCCT ACGCGCTCTA TCTGTGGCAC TGGCCGATCT TCGACATCAC CCGCCCCGGC GCCGACGTCA CCTGGGCGCC GCAGACCGTG CTGCTGGTGC GCGTCCTGGC CTCCGTGGTG CTCGCCGACC TCACCTACCG CTACATCGAG ACGCCGATCC GCCACGGCGC CCTCGGCCGT GCCGCCGACC GCGCCCGCGA GGCGTTCGGC AGGCGGGAAC TCGGGCTGCC GCTGGCGACC GCCGGCTCGG CGCTGGCGGT CGTCGCGGCG TGCGCCATGC TCGCCGACAC GCTGGTCACG ACCGCCGCCG CGCACCCTGC CGACGCCAAG GCGGTCGCCG TCGACAACCG TCCCGCCGCC GCCCTCGACG AGCCGCACGG CGCCGCCGCA CAGCCGCAGC CGCAACCCCA GCCGCACACT GCCGTCGCCG GCGCCACCCC CGCCTACCCG ACCGCCCTCC CGCCGCGCCC GGCGCATCCG CCGCGCGTGG CCCTGATCGG CGACTCGCAG GGCATGACCC TGTACCTCAA CCGCCCGCCG GACACCGCCG GCTACCTCCG CCTGCTGGAC GACACCACCG AGGGCTGCGA CTTCCTCGGC GGCCGGATCA GCAGCGGCGC CGGCGACCGC CGCGACCTGG ACGCCGAATG CGGCGGCACG GTCGCCAAGT GGGCCTCGCG CGTCACCCGC GACCACGCCG ACACCGCGCT GCTGATGGTC GGCGCCTGGG ACCTGTTCGA CGAGCAGGTG GACGGCGCCG CCCTGCCGTT CGGCACCGCC GGCTGGGACG CCTACTTCGA CACCCGGCTG GCCGCCGCCG TCAGCACCCT GAAGGCCACC GGCCTGCCGC AGCTCGACCT GGCGCTGCTG CCCTGCTACC GCCCGGTCCA CACCAGCGGC AGCTCCGGCG GCCTGTGGCC CGAGCGCGGC GACGACTCGC GCGTCGCGCA CGTCAACGCC CTGCTGTCCG CCTACGCCAC CGACCCGGCG CACCACGTCC GCGCCGTGTA TCCGCCCGCG CAGTTCTGTC AGGACCCGAC GATCGCCGCC AGCCGCTCCT ACCGCTGGGA CGGTGTCCAC TACTACAAGC CCGGCGCGCG TCTATATTTG CGGAACGCGA TCCCGCAACT CCTGGAGGCG AAGACGTCGT GA
|
Protein sequence | MEPDERARPL PRHRFVELPV FGTASGRRGS GGSDAGTART DGAAELRSIA GLEASTEADT PLRAGPEAGE SLAPQPATAR IPALDGLRAV AVAAVLLYHA GLTRFRGGFL GVDVFFVLSG YLITGLLARE YLATGAVALR RFYHRRARRL LPALFVVLAA VCAYVVLWLP SEAASFRSDA TASVFYVTNW WFVAHGQSYF GGTGRPSLLL HLWSLAVEEQ FYVVWPAFLL VALGRSPHSR GSGNGELTER TARAERAERL RALWRAVGWA TLLAACSVGL TVLLYSPWRD PSRVYYGTDT RALELLIGVL AALLQIAREK PREQAEAETQ SRPQPQPTAN NARRIATESA SFLTLAGILW AFAAVPATSS ALYPVGLIAV SVASAVLIRT LVAGTAVSGL LSGRLFVWLG ERSYALYLWH WPIFDITRPG ADVTWAPQTV LLVRVLASVV LADLTYRYIE TPIRHGALGR AADRAREAFG RRELGLPLAT AGSALAVVAA CAMLADTLVT TAAAHPADAK AVAVDNRPAA ALDEPHGAAA QPQPQPQPHT AVAGATPAYP TALPPRPAHP PRVALIGDSQ GMTLYLNRPP DTAGYLRLLD DTTEGCDFLG GRISSGAGDR RDLDAECGGT VAKWASRVTR DHADTALLMV GAWDLFDEQV DGAALPFGTA GWDAYFDTRL AAAVSTLKAT GLPQLDLALL PCYRPVHTSG SSGGLWPERG DDSRVAHVNA LLSAYATDPA HHVRAVYPPA QFCQDPTIAA SRSYRWDGVH YYKPGARLYL RNAIPQLLEA KTS
|
| |