Gene Caci_5206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5206 
Symbol 
ID8336560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5981182 
End bp5983563 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content74% 
IMG OID644958304 
Productacyltransferase 3 
Protein accessionYP_003115906 
Protein GI256394342 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.236489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.879135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTG ATGAGAGGGC GCGGCCGCTT CCGCGTCATC GCTTCGTCGA GTTGCCGGTG 
TTCGGCACCG CCTCAGGGCG GCGCGGGAGC GGCGGCTCGG ACGCGGGTAC AGCGCGGACC
GACGGAGCCG CCGAGCTGAG GTCGATCGCC GGCCTCGAAG CCTCGACGGA GGCTGACACG
CCCCTGCGTG CCGGGCCCGA AGCGGGAGAG TCCTTAGCGC CGCAGCCCGC CACCGCCCGC
ATCCCGGCCC TCGACGGCCT CCGCGCGGTC GCCGTCGCCG CCGTCCTGCT CTACCACGCG
GGCCTGACCC GCTTCCGTGG CGGGTTCCTC GGCGTCGACG TCTTCTTCGT CCTGTCCGGC
TACCTCATCA CCGGCCTGCT CGCCCGCGAA TACCTCGCGA CCGGCGCCGT CGCCCTGCGC
CGCTTCTACC ACCGCCGCGC GCGCCGTCTG CTGCCGGCGC TGTTCGTCGT CCTGGCGGCG
GTGTGCGCCT ACGTGGTGCT GTGGCTGCCG AGCGAAGCCG CGAGCTTCCG CAGCGACGCC
ACCGCCTCGG TGTTCTACGT GACCAACTGG TGGTTCGTCG CCCACGGGCA GTCCTACTTC
GGCGGCACCG GACGCCCGAG CCTGCTGCTG CACCTGTGGT CGCTGGCGGT CGAGGAGCAG
TTCTACGTCG TCTGGCCCGC GTTCCTGCTG GTCGCGCTCG GCCGGTCGCC GCATTCGCGG
GGGTCCGGGA ACGGCGAGCT AACCGAACGT ACCGCGCGCG CCGAACGCGC CGAACGCCTC
AGAGCCCTGT GGCGCGCCGT CGGCTGGGCC ACGCTGCTCG CCGCCTGCTC GGTCGGCCTG
ACCGTCCTGC TCTACTCGCC GTGGCGCGAC CCCTCCCGCG TCTACTACGG CACCGACACC
CGTGCCCTCG AGCTGCTGAT CGGCGTCCTG GCAGCGCTCC TGCAGATCGC CCGCGAGAAG
CCGCGCGAGC AGGCGGAAGC GGAAACGCAA AGTCGGCCGC AGCCGCAGCC GACAGCGAAC
AACGCACGCC GCATCGCCAC CGAATCCGCG TCCTTCCTCA CCCTGGCCGG CATCCTGTGG
GCCTTCGCCG CCGTCCCGGC GACCTCGTCC GCGCTCTACC CGGTCGGCCT GATCGCGGTG
TCCGTCGCCT CGGCGGTGCT CATCAGGACC CTGGTCGCCG GGACCGCGGT GTCCGGGCTG
CTGTCCGGCC GGCTGTTCGT CTGGCTCGGC GAACGCTCCT ACGCGCTCTA TCTGTGGCAC
TGGCCGATCT TCGACATCAC CCGCCCCGGC GCCGACGTCA CCTGGGCGCC GCAGACCGTG
CTGCTGGTGC GCGTCCTGGC CTCCGTGGTG CTCGCCGACC TCACCTACCG CTACATCGAG
ACGCCGATCC GCCACGGCGC CCTCGGCCGT GCCGCCGACC GCGCCCGCGA GGCGTTCGGC
AGGCGGGAAC TCGGGCTGCC GCTGGCGACC GCCGGCTCGG CGCTGGCGGT CGTCGCGGCG
TGCGCCATGC TCGCCGACAC GCTGGTCACG ACCGCCGCCG CGCACCCTGC CGACGCCAAG
GCGGTCGCCG TCGACAACCG TCCCGCCGCC GCCCTCGACG AGCCGCACGG CGCCGCCGCA
CAGCCGCAGC CGCAACCCCA GCCGCACACT GCCGTCGCCG GCGCCACCCC CGCCTACCCG
ACCGCCCTCC CGCCGCGCCC GGCGCATCCG CCGCGCGTGG CCCTGATCGG CGACTCGCAG
GGCATGACCC TGTACCTCAA CCGCCCGCCG GACACCGCCG GCTACCTCCG CCTGCTGGAC
GACACCACCG AGGGCTGCGA CTTCCTCGGC GGCCGGATCA GCAGCGGCGC CGGCGACCGC
CGCGACCTGG ACGCCGAATG CGGCGGCACG GTCGCCAAGT GGGCCTCGCG CGTCACCCGC
GACCACGCCG ACACCGCGCT GCTGATGGTC GGCGCCTGGG ACCTGTTCGA CGAGCAGGTG
GACGGCGCCG CCCTGCCGTT CGGCACCGCC GGCTGGGACG CCTACTTCGA CACCCGGCTG
GCCGCCGCCG TCAGCACCCT GAAGGCCACC GGCCTGCCGC AGCTCGACCT GGCGCTGCTG
CCCTGCTACC GCCCGGTCCA CACCAGCGGC AGCTCCGGCG GCCTGTGGCC CGAGCGCGGC
GACGACTCGC GCGTCGCGCA CGTCAACGCC CTGCTGTCCG CCTACGCCAC CGACCCGGCG
CACCACGTCC GCGCCGTGTA TCCGCCCGCG CAGTTCTGTC AGGACCCGAC GATCGCCGCC
AGCCGCTCCT ACCGCTGGGA CGGTGTCCAC TACTACAAGC CCGGCGCGCG TCTATATTTG
CGGAACGCGA TCCCGCAACT CCTGGAGGCG AAGACGTCGT GA
 
Protein sequence
MEPDERARPL PRHRFVELPV FGTASGRRGS GGSDAGTART DGAAELRSIA GLEASTEADT 
PLRAGPEAGE SLAPQPATAR IPALDGLRAV AVAAVLLYHA GLTRFRGGFL GVDVFFVLSG
YLITGLLARE YLATGAVALR RFYHRRARRL LPALFVVLAA VCAYVVLWLP SEAASFRSDA
TASVFYVTNW WFVAHGQSYF GGTGRPSLLL HLWSLAVEEQ FYVVWPAFLL VALGRSPHSR
GSGNGELTER TARAERAERL RALWRAVGWA TLLAACSVGL TVLLYSPWRD PSRVYYGTDT
RALELLIGVL AALLQIAREK PREQAEAETQ SRPQPQPTAN NARRIATESA SFLTLAGILW
AFAAVPATSS ALYPVGLIAV SVASAVLIRT LVAGTAVSGL LSGRLFVWLG ERSYALYLWH
WPIFDITRPG ADVTWAPQTV LLVRVLASVV LADLTYRYIE TPIRHGALGR AADRAREAFG
RRELGLPLAT AGSALAVVAA CAMLADTLVT TAAAHPADAK AVAVDNRPAA ALDEPHGAAA
QPQPQPQPHT AVAGATPAYP TALPPRPAHP PRVALIGDSQ GMTLYLNRPP DTAGYLRLLD
DTTEGCDFLG GRISSGAGDR RDLDAECGGT VAKWASRVTR DHADTALLMV GAWDLFDEQV
DGAALPFGTA GWDAYFDTRL AAAVSTLKAT GLPQLDLALL PCYRPVHTSG SSGGLWPERG
DDSRVAHVNA LLSAYATDPA HHVRAVYPPA QFCQDPTIAA SRSYRWDGVH YYKPGARLYL
RNAIPQLLEA KTS