Gene Caci_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5203 
Symbol 
ID8336557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5979135 
End bp5979740 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID644958301 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003115903 
Protein GI256394339 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG CATGCAAGAC TTTCCGCGTG CAGCACAGGA GCCACAAAAC ACGCTTGGCG 
GTCGCCATAT CCACGGCCAC CGTGCTGGCT GTCGGGCTGG CCGCCTGCGG TGGCGCGGGC
CCGAAGAACG CGGCGGGTCT GGGGACGGCC GGCGCCATCG CGGCCGACCA CCGCAAGCCG
TTCCCGGTGC TCTCCGGGAC CACCCTCGAC GGCGCCCAGC TCGATCTGAG CTCGTACAAG
GGCCAGATCG TGGTCATGAA CATCTGGGCG TCGTGGTGCG ACAGCTGCGA GGCGGAGGCT
CCGTACCTGG AGCACGCCTA CGAGACGTAC AAGGACAAGG GCGTGCGGTT CGTCGGCATC
GACGCGGGCG ATGACAACAC CGGACAGGCG CGGGCGTTCG TCAAGGCCAA GCAGATCGGC
TACCCGAACC TGGTCGACGG CGTCGACGAG AAGCTGCTCA CCAAGCTCGC CGGGATCACC
TCCCTGGGCT CGGTCCCCTC GACGCTGATC ATCGACAAGA ACGGCGACCT GGCCTGGCGG
TCACTGCGCC CCGTGGACTA CAACGCCCTG TCCGCGGCGC TCGGTCCGGT CATCGCGGAG
CAGTAG
 
Protein sequence
MDAACKTFRV QHRSHKTRLA VAISTATVLA VGLAACGGAG PKNAAGLGTA GAIAADHRKP 
FPVLSGTTLD GAQLDLSSYK GQIVVMNIWA SWCDSCEAEA PYLEHAYETY KDKGVRFVGI
DAGDDNTGQA RAFVKAKQIG YPNLVDGVDE KLLTKLAGIT SLGSVPSTLI IDKNGDLAWR
SLRPVDYNAL SAALGPVIAE Q