| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5194 |
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| Symbol | |
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| ID | 8336548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5971160 |
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| End bp | 5972326 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958292 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_003115894 |
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| Protein GI | 256394330 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.17709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.981457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CCACAGCAGG CACCGACAGC GCGGGCCCGG CCACGACGGC CGCGCCGGCC
GGATCCCGGC TGGCCCGCAT CCGGGCGAGC CTGACCCCCG CCGAGTGGGG ACGGGTCGGG
GGCATGTTCG GCTTCATCGC GCTGCTGCAC GTGGTCGGCT GGGGCATCCT GGCCGCGCTG
GTCGTCCCGG GCCACTACCA GCTGCAGGGC GGCCTGTTCG GCTTCGGCAC CGGTCTGACC
GCCTACACCC TGGGCATGCG GCACGCCTTC GACGCCGACC ACATCGCGGC GATCGACAAC
ACCACCCGCA AGCTGATGGC CGAGGGCAAG CGCCCGCTGT CGGTCGGCTT CTGGTTCTCC
CTGGGGCACT CCACGATCGT GGTCGTCCTG ACCCTGCTGC TGGGCCTCGG GCTGAAGGGC
CTGGGAGTCG AGCTGAGCGA TGACAAGTCC GGGCTGCACA GCTTCGGCGG CCTGATCGGG
ACCACGGTCT CCGGCACGTT CCTGTACCTG ATCGCGATCA TCAACCTGGT GGTGCTGGTC
GGGATCCTGA AGGTGTTCCG GCAGATGCGG CGCGGGGAGT TCGACGAGGC CACGCTCGAG
GAGCACCTGA ACAACCGCGG CCTGATGAAC CGGTTCCTGG GCCGGGCCAT GAAGGCGGTG
ACCAAGCCCT GGCAGATCTA CCCGGTCGGC GTGCTGTTCG GGCTGGGCTT CGACACCGTC
ACCGAGGTCG GGCTGCTGGT GCTGGCCGGC ACGTCGGTGG CCTCGGGGCT GCCCTGGTAC
GCGGTGATGT GCCTGCCGGT CCTGTTCGCC GCGGGCATGT CGCTGCTGGA CACCATCGAC
GGCTCGTTCA TGAACTTCGC CTACGGCTGG GCCTTCTCCA AGCCGGTGCG CAAGGTGTTC
TACAACATCA CGATCACCGG CCTGTCGGTG GCCGTGGCGC TGATCATCGG CACCATCGAG
CTGCTGAGCA TCCTGCAGGA CAAGCTGAAC CTGACCGGCG GCTTCTGGAA CTGGATCGCC
AACGTCGACC TGAACAGCAT CGGGTTCGCC ATCGTGGGCA TGTTCCTGCT GGTGTGGCTG
GCCGCCGTGG CGGTGTGGAA GTTCGGCCGG ATCGAGCAGA AGTGGACCGC GGCGCTGCCG
GTGGCCGAGG ATGTTACCGA CCAGTAG
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| Protein sequence | MTATTAGTDS AGPATTAAPA GSRLARIRAS LTPAEWGRVG GMFGFIALLH VVGWGILAAL
VVPGHYQLQG GLFGFGTGLT AYTLGMRHAF DADHIAAIDN TTRKLMAEGK RPLSVGFWFS
LGHSTIVVVL TLLLGLGLKG LGVELSDDKS GLHSFGGLIG TTVSGTFLYL IAIINLVVLV
GILKVFRQMR RGEFDEATLE EHLNNRGLMN RFLGRAMKAV TKPWQIYPVG VLFGLGFDTV
TEVGLLVLAG TSVASGLPWY AVMCLPVLFA AGMSLLDTID GSFMNFAYGW AFSKPVRKVF
YNITITGLSV AVALIIGTIE LLSILQDKLN LTGGFWNWIA NVDLNSIGFA IVGMFLLVWL
AAVAVWKFGR IEQKWTAALP VAEDVTDQ
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