Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5193 |
Symbol | |
ID | 8336547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5968614 |
End bp | 5970872 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958291 |
Product | glycosyl transferase family 51 |
Protein accession | YP_003115893 |
Protein GI | 256394329 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.272717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGC GTGTGATCGA CTACCCGCGC CGCGGGAAGG CCGGGCTGCG GCACTGGCTG CCGTCCTGGC GGCTGGTCGC CAGCACGCTG ATCGCGTTCG TGCTGCTGGT GACCGGCGGG GCGTGGGCGG TCTACGCGTC GATCTCCATC CCGCCGATCA ACGAGACGGT GACCCAGCAG CACCTGACCG TGGTCGACGA CAAGGGCGTG GTGCTGGGCC GGCGCGGTCC GGAGATCCGC CAGGACGTGC CGCTGGCGCA GGTCCCGGTC CCGGTGCAGA ACGCCTTCCT GTCCGCCGAG GACCGCAACT TCTGGTCCGA CGGCGCGATC TCGCTCACCG GCACGGCCCG TGCCCTGCTC AACGACCTTG GCGGCGGCTC CACGCAGGGT GGCTCCACGA TCACGCAGCA GTACGTGAAG AACGCCTACC TCACCGACGA GCGCACCCTG TCGCGCAAGG TCAAGGAAGC GGTCATAGCC CTGAAGATCT CGGAGAAGCA GCCCAAGTCC GAGATCCTGC AGGGCTACCT CAACACCGTG TACTTCGGCC GCGGCGCCTC CGGCGTCCAG ATGGGCGCCC GCGCCTGGTT CAGCAAGGAC ATCAACCAGC TCTCGGTCGC CGAGGGCGCC GTGATGGCCG CTCTGGTGAA CGCCCCCTCG TACTACGAGC TGGCGCCCAA GGACCCCTCG ATCATGGCCA AGCTCCAGGC ACGCTGGAAC TACGTGCTCG ACGGCCTGGT CACCATGGGC AAGCTGACCC CCGCCGACCG CGCCGCGCAG CAGTTCCCGG CGCTGGCGCC CTGGCCGCGG CCCAGCAGCG AGACCGACAA CCAGGACGAG TACCTGATCG AGGAAGCGAT CGGCGAGGCC GAGCAGAAGA CCGGGCTCAG CCGCGAGCAG CTGGAGACCG GCGGCTACAC GATCTACACC ACCTTCGACG CCAAGATGCA GGACGCGGCG GCCGCCGCGG TGAAGGCACA GATCACCAGC CAGCTCAACG CGAGCAAGCG GCCCGTCGAC GCTGACGTGC ACACCGCGAT CTCGACGGTC GTCCCCGGAG ACGGCGCGGT CCGCGTCCTG TACGGCGGCG ACGACTACTC CAAGGAGGCC TTCAACGCCT CCTGGCAGGG CACGCTGTCC CCGGGCTCGT CGTTCAAGAC CTTCGCGCTG GCCGCGTACC TGCAGAACGG CGGCACGGTC AGCGACACCT TCGACGGCAC CTCGCCCTTC CACCTCCCGA ACAGCAACAC GGTGATCCCG AACGAGGGCG GGACGAGCTA CGGCGACGTC TCGGTGCAGT ACGCGCTGAA CCAGTCGATC AACACCGTGT TCGTCGAGAT GGGACAGAAG ATCGGGATGA CCAAGGTCGC CGACGCCGCG CGCGCCGCCG GCATCCCGGT GACCGCGCAG CAGCAGTCGC TGCCGGCGCT GCCGCTGGGC GTGGTGTCCA CCAACCCCGA GCAGATGGCC GCCGCCTACG GCACGTTCGC CGCGCACGGC TCGCAGGTCG ACCCGTACAC GGTCGCCAGC GTGCAGCAGG GCGGCAAGAC CATCTACGCG CACCAGAGCC TGGCCAAGCA GGCCTTCACC CCCCAGGTCG CCGACCAGGT GACCCAGGCG CTGCAGAACG TGGTGACCAA CGGCTCCGGC GGCGGCGCGC AGCTGGCCGA CGGCCGTGAC GTGGCCGGCA AGACCGGCAC CACCGACCTG CCCGGCGACG GCTCGAAGCT GGGCTCGGTC TGGTTCGTCG GCTACACCCC GACGCTGTCC ACGGCGGTCG CGGTCTGGGG ACAGACCGAC GGCGGGGCGC TGACCCCGAT CAACGGCATG GCCGGCAAGG ACACCGTCGG CGGCGGCGCT GTCGCCGCGC CGCTGTGGGC CGCGTACATG GACAAGGCGG TGGAGGGCAC GACCGCGCAG AAGTTCACCT TCACCGCGCA GAACAACCAG GCGGCGCCGA TGAACCCGCT GAGCCCGTCG GGCTCGACCA CCGGGACCAC CGGCGCGACC CCGGGCAAGT CCTCGACCGG GCTGCCCTCG CCGCCGTCGC CGACCGGCAC CTACCAGCCG CCGTCGCCGA CGACCACCAC GAGCAGCAGC GGCGGGAAGT CCACGACGAC CACGTCCGGG GGCGGGTCGA CGTCGTCGAA GTCGCAGCCG CCGTCCTCGA CGCGGTCGCG GCCGACGAAG CCGAAGCCGA GCTCGACGAG TTCCACCGGG CAGACCGGCG GTCCGCTGCC GCAGTCGAGC GGCGGGTGA
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Protein sequence | MALRVIDYPR RGKAGLRHWL PSWRLVASTL IAFVLLVTGG AWAVYASISI PPINETVTQQ HLTVVDDKGV VLGRRGPEIR QDVPLAQVPV PVQNAFLSAE DRNFWSDGAI SLTGTARALL NDLGGGSTQG GSTITQQYVK NAYLTDERTL SRKVKEAVIA LKISEKQPKS EILQGYLNTV YFGRGASGVQ MGARAWFSKD INQLSVAEGA VMAALVNAPS YYELAPKDPS IMAKLQARWN YVLDGLVTMG KLTPADRAAQ QFPALAPWPR PSSETDNQDE YLIEEAIGEA EQKTGLSREQ LETGGYTIYT TFDAKMQDAA AAAVKAQITS QLNASKRPVD ADVHTAISTV VPGDGAVRVL YGGDDYSKEA FNASWQGTLS PGSSFKTFAL AAYLQNGGTV SDTFDGTSPF HLPNSNTVIP NEGGTSYGDV SVQYALNQSI NTVFVEMGQK IGMTKVADAA RAAGIPVTAQ QQSLPALPLG VVSTNPEQMA AAYGTFAAHG SQVDPYTVAS VQQGGKTIYA HQSLAKQAFT PQVADQVTQA LQNVVTNGSG GGAQLADGRD VAGKTGTTDL PGDGSKLGSV WFVGYTPTLS TAVAVWGQTD GGALTPINGM AGKDTVGGGA VAAPLWAAYM DKAVEGTTAQ KFTFTAQNNQ AAPMNPLSPS GSTTGTTGAT PGKSSTGLPS PPSPTGTYQP PSPTTTTSSS GGKSTTTTSG GGSTSSKSQP PSSTRSRPTK PKPSSTSSTG QTGGPLPQSS GG
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