| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5186 |
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| Symbol | |
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| ID | 8336540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5961703 |
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| End bp | 5962980 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958284 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003115886 |
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| Protein GI | 256394322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG CCCGGGACGG AGCCCGGCGG GGTACGGACT GCCGCCGCCG CCCGCCGCAC
CGCCGGCGGG CCTTCGCGGC GCTGGCGCTG GCCGCCGCCA CGGCCGCCGC CTCGGGCTGC
GCGTTCGGCG GCGGCTACTA CCGCTACAGC GACCCCGCCG CGCGTCCGGC CGGCGGGACG
CCGCTGCCGG TGGGGCTGCT GCTGGACCTC TCCGGCGCCA ACGGCTCGGC CGGCGCCGAC
GCCCGCGACG GCTTCCAGCT CTACGTCCGC CAGCACGGCG GCCGGCTCGG CGGGCGCCCG
GCGCAGCTGA CGATCTCCAA CGAGGGCCCG ACCCCGGCCG CCACCGCGAC GACGATGCAG
GACCTGCTGG CGCACGGCGT GCAGGCGGTC GTCGGCCCGA TCGACTACGC GGGCTACGAG
AGCGCGGCGC CGCTGGCCGA CGCCGCGCAC GTGCCGCTGG TCGGCGTGGT GGCGCGGCCG
GACGTGACGG ACATCAGCTA CGTGTGGAAC GTGGCGTTCC TGTCCACCGA GCCCGGCGCG
GCGCTCGCGC CGTTCATCTA CAACCACGTC AAGTCCCCGG TCTACGCGAT CGGCGGCAAC
TACCCCGGCG ACTGGGAGCA GGTCCGCGGC TTCACCGACG CCTACTACGC GCTCGGCGGC
AGGCTCGCCA ACCCCGAGAA CCTGCCGACG TTCACCCCGG CTGCGTCCTT CGGCCCGGCG
AACGCGACCA CTGACTTCGC GCCGTATCTC CAGGCGATCA AGGCCTCCGG AGCGAAGGCG
GTGTACTGCG CCTTCACCGG CGACGAGGCG GTGCGCTTCG TGCAGCAGTA CGCGCGCTCG
GTGGTCAAGA ACATCCCGTT GTACGCGGTC GGGCTCGTCA CCGACGGCCC GCTGCTCCAG
CAGGAGGGCG CGGCGGCCAC GAACATCACG TCGGTGCTGG ACTACTCCCC CGACGTCGAC
ACCGCCGCCA ACCGCGCCTT CGTCTCGGCG TGGGCCGCCG GCCACGACGG ACGCGAACCC
AGCGTCTACT CGCTGACCGG CTACGACGCC GCGGCGCTGC TGGACCAGGC GGTCGCCCAG
GCCGGGCCGA AGGCCGACGC CGCGTCGATC AACGCCGCGA TCGGGGCGCT GGGGCGGATC
GACAGCCCGC GGGGGGCGTG GCAGCTGGCG TCCTCGACGC ACGCGCCGAT CCAGAAGTGG
TACCTGCGGC GGGTGCAGGT CGACGGGACG GCTTTGGCGA ACGTGGAGAT CGAGGAATTG
GCTACGCTGC CTGATTGA
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| Protein sequence | MAAARDGARR GTDCRRRPPH RRRAFAALAL AAATAAASGC AFGGGYYRYS DPAARPAGGT
PLPVGLLLDL SGANGSAGAD ARDGFQLYVR QHGGRLGGRP AQLTISNEGP TPAATATTMQ
DLLAHGVQAV VGPIDYAGYE SAAPLADAAH VPLVGVVARP DVTDISYVWN VAFLSTEPGA
ALAPFIYNHV KSPVYAIGGN YPGDWEQVRG FTDAYYALGG RLANPENLPT FTPAASFGPA
NATTDFAPYL QAIKASGAKA VYCAFTGDEA VRFVQQYARS VVKNIPLYAV GLVTDGPLLQ
QEGAAATNIT SVLDYSPDVD TAANRAFVSA WAAGHDGREP SVYSLTGYDA AALLDQAVAQ
AGPKADAASI NAAIGALGRI DSPRGAWQLA SSTHAPIQKW YLRRVQVDGT ALANVEIEEL
ATLPD
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