Gene Caci_5185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5185 
Symbol 
ID8336539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5961116 
End bp5961703 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID644958283 
Productprotein of unknown function ATP binding 
Protein accessionYP_003115885 
Protein GI256394321 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.729225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTC CCACGATCGC CGCGAAGATC GTCGTGGCCG GCGGCTTCGG CGTCGGGAAG 
ACCACGCTGG TCGGCGCGGT CTCCGAGATC CAGCCGCTGA CCACCGAGGC GGAGATGACG
CAGGCCGGGG TCGGGCTGGA CGACGTCCAC CTGATCCCGG CCAAGCGCAA CACCACCGTG
GCGATGGACT TCGGCCGCAT CACCATCGCC GAGGACCTGA TCCTGTACCT GTTCGGCACA
CCCGGACAGG AGCGGTTCTG GTTCTTCTGG GAGGAGCTCT CCCGAGGCGC CCTCGGCGCG
GTGGTGCTGG CCGATGTGCG TCGGCTCGGT GACGCCTTCG CGGTCATCGA CTTCTTCGAG
GACCGCCACA TCCCGCACGT CATAGCCGTG AACCAGTTCG ACGGCGCGCA GGTGTACGGG
CACGAAGAGC TGCGCCAGGC GCTCGCCCTG GAGGACGACA CGCCGCTGCT GATCTGCGAC
GCCCGGCGGC GCGACTCGGC CAAGGGAGTC CTGGTCACGC TGCTGGAGCA CGCGATCACC
CAGCAGCGGA TGCGCGAGGA CCTGCCGTCC GACGACCGGA TGAACTGA
 
Protein sequence
MAAPTIAAKI VVAGGFGVGK TTLVGAVSEI QPLTTEAEMT QAGVGLDDVH LIPAKRNTTV 
AMDFGRITIA EDLILYLFGT PGQERFWFFW EELSRGALGA VVLADVRRLG DAFAVIDFFE
DRHIPHVIAV NQFDGAQVYG HEELRQALAL EDDTPLLICD ARRRDSAKGV LVTLLEHAIT
QQRMREDLPS DDRMN