Gene Caci_5184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5184 
Symbol 
ID8336538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5960679 
End bp5961116 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content72% 
IMG OID644958282 
ProductRoadblock/LC7 family protein 
Protein accessionYP_003115884 
Protein GI256394320 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC CTGCACCCGA TCTCCACGGC AGCCTCGACT GGCTGCTCAA CGACTTCGCC 
CACGGGACCC CCGGGGTCCG GCACGCGCTG GCGGTCTCGG CCGACGGCAT CGTCGTGGCC
ACCTCCCGGG ACCTGGGCGA GGAACAGGGA GAGCAGCTCG CGGCGGTGGC CGCCGGCCTG
GTGAGCCTGC TGGCCGGAGC CGCGCGGCTG CTGGAGTCCG AGCCGGTGCG CAGCAACCTG
ACCGAGCTCG GGGACGGCTT CCTGTTCTCC ATGGCGGTCA GCGACGGCGC CTCGCTGCTG
GTCTACGCCG AGCGCGAGTG CGACATCGGC CAGGTCACCT ATGCCATGGC CGAGCTGATC
AACCAGGTCG GGGACTCCCT GACGCCGACC GCCAGGGCCC GCATGCTCTC CGAGAGCAAC
CTGCCGGGGG CCCGCTGA
 
Protein sequence
MNEPAPDLHG SLDWLLNDFA HGTPGVRHAL AVSADGIVVA TSRDLGEEQG EQLAAVAAGL 
VSLLAGAARL LESEPVRSNL TELGDGFLFS MAVSDGASLL VYAERECDIG QVTYAMAELI
NQVGDSLTPT ARARMLSESN LPGAR