Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5184 |
Symbol | |
ID | 8336538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5960679 |
End bp | 5961116 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958282 |
Product | Roadblock/LC7 family protein |
Protein accession | YP_003115884 |
Protein GI | 256394320 |
COG category | [R] General function prediction only |
COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAC CTGCACCCGA TCTCCACGGC AGCCTCGACT GGCTGCTCAA CGACTTCGCC CACGGGACCC CCGGGGTCCG GCACGCGCTG GCGGTCTCGG CCGACGGCAT CGTCGTGGCC ACCTCCCGGG ACCTGGGCGA GGAACAGGGA GAGCAGCTCG CGGCGGTGGC CGCCGGCCTG GTGAGCCTGC TGGCCGGAGC CGCGCGGCTG CTGGAGTCCG AGCCGGTGCG CAGCAACCTG ACCGAGCTCG GGGACGGCTT CCTGTTCTCC ATGGCGGTCA GCGACGGCGC CTCGCTGCTG GTCTACGCCG AGCGCGAGTG CGACATCGGC CAGGTCACCT ATGCCATGGC CGAGCTGATC AACCAGGTCG GGGACTCCCT GACGCCGACC GCCAGGGCCC GCATGCTCTC CGAGAGCAAC CTGCCGGGGG CCCGCTGA
|
Protein sequence | MNEPAPDLHG SLDWLLNDFA HGTPGVRHAL AVSADGIVVA TSRDLGEEQG EQLAAVAAGL VSLLAGAARL LESEPVRSNL TELGDGFLFS MAVSDGASLL VYAERECDIG QVTYAMAELI NQVGDSLTPT ARARMLSESN LPGAR
|
| |