| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5182 |
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| Symbol | |
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| ID | 8336536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5956191 |
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| End bp | 5957927 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958280 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115882 |
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| Protein GI | 256394318 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.459442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCC TTCCCGAGTC CGACCCCGGC AGACCCGACA CGCGCTCGGC GACCCGGTAC
TTGATCTGGC TCGTACGGAT GCAGTGGACG TCGATGGCCT TAGGCGCGTT CTGGGGCGTG
GTCTGGATGG TCAGCCAGGC GCTGATGCCC GCCGCGATCG GCAAGACCAT CGACGCCGGC
GTCACCGCGA AGGACACCGC GGAGCTGTGG CGGTGGTCCG CGGTGGTCTT CGCCCTGGGC
TGCGTCACCG GTGTGGCCGG GACCCTGCGG CACCGCTGCG CGGTCACCAA CTGGCTGACC
GCCGCCTACC GCACCGTGCA GCTCACCGCG CGCCAGGCGA CCGACCTCGG CGCCACGCTG
CCCAGCCGTA TCGCCACCGG CGACGTCGTG GCCATCGGCA CCGCGGACAC CTCCAGCATC
GGCGGCACGA TGGACGTCAG CGCGCGCTTC GCCGGCGCGG TGGTCTCCGT GATCCTGGTC
TCGATCCTGC TGCTGAGCAC CGAGGTGCGC ATCGGGCTCA CCGTGCTGAT CGGCGTGCCG
CTGATCATGG CGCTGGTCGG GCCGCTCCTC AAGCCGATGC ACCGCCGCCA GGGCGAGGTG
CGCACGCTGC AGGGCAAGCT CACCGGCCGC GCCAACGACA TCGTCGCCGG GCTCCGGGTG
CTGCGCGGCA TCGGCGGCGA GCCGGAGTTC GCCGAGCGCT ACCGGGAGCA GTCGCAGCAG
CTGCGGTTCG CCGGGGTGCG GGTGGCGCGC GTGGAATCGG TGCTGGAGTC GGCGCAGGTG
CTGCTACCGG GGCTGTTCGT GGTCGGCGTG ACCTGGCTCG CCGCGCGGCT GGCGGTGTCG
CACGACATCA CCACCGGGCA GCTGGTCGCC TTCTACGGCT ACGCCGCGTT CCTGGTGCTG
CCGCTGCGGA CCATCACCGA GGCCTGGGGC AGGGTGCTGC GGGCGCATGT CGCGGCGACG
AAGGTTGTCA GGGTTCTGGC ACTGAGCCAC CCGCTCGCCG AAGCCTCCGG TTCCAAGGCT
GACGCCGCCG ACACCGCCGG TACCGGCGCG CTCGCCGACG AGCACTCCGG CCTGTCCCTG
GCGCCCGGGT CGTTCACGGC GGTCGCCGCC GCCGACCCGG CCGAGGCGAT CGAGCTGGCC
GACCGGCTCG GCCGCTACCG GGCTGCCGAC GGCGTCACGC TGGACGGCGT ACCGCTGGAG
TCGATGCCGC TGGTCCGGCT GCGGCAGCGG GTTCTGGTCG CGGACAACGA GGCGCGGCTG
TTCGCCGGAC GGCTGGCTGA GGAGCTGGCC AGGGTTGGTG CCCGCAGTGC CGGTGAACAT
GCCGCCGACG AAAGCGGTGT CACCGCAGCC CTGCACACAG CGGCGGCCGA GGACATCGTC
GAGGCGCTGC CCGAGGGCCT GGACACCGCG GTCACCGAGC GCGGACGTTC CTTCTCCGGC
GGGCAGCAGC AACGGCTCCG CCTGGCGCGC GCCCTGCTCG CCGACCCCGA AGTGCTGCTG
CTCGTCGAGC CCACCAGCGC GGTCGACGCG CACACCGAGG CGCGCATCGC CGAGCGGTTG
GCGCAGGCGC GCACCGGCCG CACCACCGTG GTGTTCACCA CCAGCCCGCT GATGCTCGAC
CGCGCCGAGC GCGTGGTGTT CCTGGCCGGC GGCCGGGCCG CCGCCGAGGG CCGGCACCGC
GAGCTGCTGG CGACCGTGCC CGCCTACCGG GCCACTGTGA CCAGGGAAGA GGACTGA
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| Protein sequence | MRRLPESDPG RPDTRSATRY LIWLVRMQWT SMALGAFWGV VWMVSQALMP AAIGKTIDAG
VTAKDTAELW RWSAVVFALG CVTGVAGTLR HRCAVTNWLT AAYRTVQLTA RQATDLGATL
PSRIATGDVV AIGTADTSSI GGTMDVSARF AGAVVSVILV SILLLSTEVR IGLTVLIGVP
LIMALVGPLL KPMHRRQGEV RTLQGKLTGR ANDIVAGLRV LRGIGGEPEF AERYREQSQQ
LRFAGVRVAR VESVLESAQV LLPGLFVVGV TWLAARLAVS HDITTGQLVA FYGYAAFLVL
PLRTITEAWG RVLRAHVAAT KVVRVLALSH PLAEASGSKA DAADTAGTGA LADEHSGLSL
APGSFTAVAA ADPAEAIELA DRLGRYRAAD GVTLDGVPLE SMPLVRLRQR VLVADNEARL
FAGRLAEELA RVGARSAGEH AADESGVTAA LHTAAAEDIV EALPEGLDTA VTERGRSFSG
GQQQRLRLAR ALLADPEVLL LVEPTSAVDA HTEARIAERL AQARTGRTTV VFTTSPLMLD
RAERVVFLAG GRAAAEGRHR ELLATVPAYR ATVTREED
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