Gene Caci_5167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5167 
Symbol 
ID8336521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5936694 
End bp5938661 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content68% 
IMG OID644958265 
ProductK potassium transporter 
Protein accessionYP_003115867 
Protein GI256394303 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0763503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.222033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTG ACGCCGCGGG GCCATCCTCG CAGACCACCA CCGGTGCCGA CCCGGACGCC 
GGGCACCGGA CGCACAAGGC CGGCGCGGCC GCGCTGATGC TCGGCGCGCT GGGGGTCGTG
TTCGGGGACA TCGGGACCAG CCCGCTGTAC GCGATGCAGA CGGTGTTCAC CGCCGACAAC
AGGGCGGTGG GCACCTCTGC CGACCAGGTC TACGGGGTGG TGTCGCTGAT CTTCTGGGCG
ATCACGCTGA TCGTGTCGAT CAAGTACGTG AGCTTCATCC TGCGGACCGA CAACGACGGC
GAGGGCGGCA TCATGGCCCT GACCGCCCTG ATCCAGAAGC TGGACTTCCG CTCCACCCGG
AGCAAGATAC TGCTGGTCGC GCTCGGGATA CTCGGTGCGT CGCTGTTCTA CGGCGACGGC
ATGATCACCC CGGCGATCTC GGTGTTGTCG GCGGTCGAAG GGCTCAAGGT CTCGGCGCCG
GGACTCAAGG ACTACGTCGT GCCGCTGACC GTGGTGATCG TCATCGGGCT GTTCGCCATC
CAGAAGTTCG GCACGGCGCT GGTCGGCGGG CTGTTCGGAC CGGTGATGAC GGTCTGGTTC
CTGATCATCG GCGTGGCCGG GGCGTCGGAG ATCGCGGCGC ACCCGGGCAT CGTCAGGGCC
CTGTCCCCCA CCTACGGCGC GCAGTTCCTG GTGCACCACG GCGTCGTGGC GTTCATCGCG
CTGGCCTCGG TGGTGCTGGC GGTGACCGGC GCCGAGGCGC TGTACGCCGA CATGGGCCAC
TTCGGGCGCA AACCGATCCA CCGCGCCTGG TTCTTCATGG TGTTCCCGGC GCTGACGCTG
AACTACCTGG GGCAGGGCTC GCTGATCCTG CGCCGCCCGG AGACCGTCTC CAACCCCTTC
TTCCTGCTGA TGCCGAGCTG GTCGCAACTG CCGATGGTGA TCCTGGCCAC GATAGCGACG
GTCATCGCCT CGCAGGCGGT CATTTCCGGG GCTTTCAGTG TGACCCGGCA GGCGATGCAG
CTGGGCTTCC TGCCGCACAT GACCATCCGG CACACCTCCG AGCACGAGAT CGGGCAGGTC
TACGTCCCGG TCGTGAACTG GTTCCTGTGC TGCACGGTCA CGGTGCTGGT CATCGGCTTC
GGCTCCTCGG CGTCGCTGGC GTCCGCCTAC GGCGTCGCGG TGACGGCGAC GTTCATGCTG
AACACCATCC TGTTCCTGGC GGTCGCACGG GTCCTCAAGG GCGTCGCGCC CTGGAAGATC
GCGGTGGGCG CGGTCCTGTT CCTGACCACC GAGACCGCGT TCTTCGCGGC CAACCTCACC
AAGGTGATCC ACGGCGGCTG GCTGCCGCTG CTGGTCGCGA CGTTCGTCTT CACCGTGCTG
AGCACCTGGC GCCGCGGCCG TGCGATCGTC ACCCCGAACC GCACCACGCT GGAGGGCCCC
CTGCGCCCCT TCGTGGACGA GGTGGACGCC CTGGAGCCGC CGATCCACCG CGTGGACGGC
GTCGCGGTGT TCCTCAACGC CAACATCGAG ACCACGCCGC TGGCCCTGCG CGCCAACGTC
GAGCACAACC ACGCGCTGCA CAAGACCGTG GTCATCCTGT CGATGATGGT GGAGAAGGTC
CCGCACGTCC CAGCCGCCGA ACGCCTGGTC TTCGACGACC TCGGCCACAC CGACGACGGC
ATCATCCACC TCACCGCCCG CCTGGGCTTC CAGGACGAAC CCGACGTCCC CCGCCTCCTG
CGCCAAGCCG TCGACCACCC CGACGCCGGC GAGATCGCCG GCATCGACGT GGACACGGTG
TCGTACTTCC TGTCCCGCAT CGCCATCGTC CGCACGAACG CCAAGGGGAT GCGCTCGTGG
CGCAAGCGGC TGTTCCTGAC GATCGCGCAC AACGCGGCGA GTCCGGTGAA CTACTTCGGC
TTGCCGGCTG ATCGGTGCGT GATCATGGGA GCGCATGTGC CGGTGTAG
 
Protein sequence
MIADAAGPSS QTTTGADPDA GHRTHKAGAA ALMLGALGVV FGDIGTSPLY AMQTVFTADN 
RAVGTSADQV YGVVSLIFWA ITLIVSIKYV SFILRTDNDG EGGIMALTAL IQKLDFRSTR
SKILLVALGI LGASLFYGDG MITPAISVLS AVEGLKVSAP GLKDYVVPLT VVIVIGLFAI
QKFGTALVGG LFGPVMTVWF LIIGVAGASE IAAHPGIVRA LSPTYGAQFL VHHGVVAFIA
LASVVLAVTG AEALYADMGH FGRKPIHRAW FFMVFPALTL NYLGQGSLIL RRPETVSNPF
FLLMPSWSQL PMVILATIAT VIASQAVISG AFSVTRQAMQ LGFLPHMTIR HTSEHEIGQV
YVPVVNWFLC CTVTVLVIGF GSSASLASAY GVAVTATFML NTILFLAVAR VLKGVAPWKI
AVGAVLFLTT ETAFFAANLT KVIHGGWLPL LVATFVFTVL STWRRGRAIV TPNRTTLEGP
LRPFVDEVDA LEPPIHRVDG VAVFLNANIE TTPLALRANV EHNHALHKTV VILSMMVEKV
PHVPAAERLV FDDLGHTDDG IIHLTARLGF QDEPDVPRLL RQAVDHPDAG EIAGIDVDTV
SYFLSRIAIV RTNAKGMRSW RKRLFLTIAH NAASPVNYFG LPADRCVIMG AHVPV